| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd9a | 0.229 | top1l | -0.020 |
| hoxa11b | 0.199 | cadm3 | -0.018 |
| hoxc10a | 0.189 | rpa3 | -0.018 |
| hoxd11a | 0.154 | ncapg | -0.018 |
| hoxd10a | 0.154 | lbr | -0.017 |
| hoxa9a | 0.150 | seta | -0.017 |
| hoxc11a | 0.146 | lig1 | -0.017 |
| hoxd12a | 0.146 | rrm1 | -0.016 |
| hoxa9b | 0.145 | mki67 | -0.016 |
| hoxc9a | 0.140 | chaf1a | -0.016 |
| hoxb9a | 0.140 | anp32a | -0.016 |
| hoxa13b | 0.129 | hmgb2a | -0.016 |
| LOC108190371 | 0.122 | dek | -0.016 |
| hoxb10a | 0.112 | CABZ01005379.1 | -0.015 |
| hoxc3a | 0.106 | mcm4 | -0.015 |
| hoxa11a | 0.101 | XLOC-042899 | -0.015 |
| hoxd3a | 0.100 | ranbp1 | -0.015 |
| si:dkey-29p23.2 | 0.097 | smc2 | -0.014 |
| XLOC-033650 | 0.096 | pcna | -0.014 |
| CR388042.2 | 0.094 | alyref | -0.014 |
| hoxc13a | 0.092 | snrpb | -0.014 |
| SPATA48 | 0.091 | hes2.1 | -0.014 |
| hoxc12a | 0.090 | slbp | -0.014 |
| RF00138 | 0.089 | mcm6 | -0.014 |
| hoxc11b | 0.089 | baz1a | -0.014 |
| hoxb8a | 0.088 | hells | -0.014 |
| si:dkey-58f6.2 | 0.088 | noc2l | -0.014 |
| pmp22a | 0.087 | odc1 | -0.013 |
| hoxb7a | 0.083 | tuba1b | -0.013 |
| nanos1 | 0.081 | baz1b | -0.013 |
| BX005254.2 | 0.080 | dkc1 | -0.013 |
| col5a2a | 0.075 | hes2.2 | -0.013 |
| hapln1a | 0.075 | mcm3 | -0.013 |
| si:ch73-236c18.5 | 0.074 | orc4 | -0.013 |
| ntd5 | 0.074 | banf1 | -0.013 |