| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxa11b | 0.362 | fibina | -0.088 |
| hoxd9a | 0.350 | foxp4 | -0.078 |
| hoxa13b | 0.284 | dlx5a | -0.074 |
| hoxa9b | 0.263 | barx1 | -0.072 |
| hoxd12a | 0.257 | six1a | -0.071 |
| hoxd10a | 0.227 | six2a | -0.064 |
| hoxb9a | 0.215 | dlx2a | -0.063 |
| hoxd11a | 0.209 | hpgd | -0.062 |
| hoxb10a | 0.206 | eya1 | -0.060 |
| clic2 | 0.198 | cldn11a | -0.059 |
| tbx5a | 0.198 | dlx4a | -0.058 |
| hoxc10a | 0.197 | dlx3b | -0.058 |
| hoxc11a | 0.196 | igf2b | -0.057 |
| hoxd13a | 0.184 | dlx1a | -0.056 |
| hoxa11a | 0.184 | foxf2a | -0.054 |
| emilin3a | 0.181 | lhx6 | -0.053 |
| hoxc9a | 0.174 | otos | -0.053 |
| samd10a | 0.169 | cd248b | -0.052 |
| hoxa9a | 0.156 | vasna | -0.052 |
| ppp1r1c | 0.156 | gsc | -0.052 |
| col8a2 | 0.141 | adgrl2a | -0.051 |
| cyp1b1 | 0.139 | LO018188.1 | -0.051 |
| fam49a | 0.133 | dlx4b | -0.051 |
| emilin2b | 0.130 | nfia | -0.050 |
| tuba8l2 | 0.126 | twist2 | -0.049 |
| si:dkey-19b23.8 | 0.124 | hoxa2b | -0.049 |
| rxfp2a | 0.123 | ociad2 | -0.048 |
| itga9 | 0.122 | cdh11 | -0.048 |
| hoxc11b | 0.120 | grem2b | -0.047 |
| hand2 | 0.115 | prss35 | -0.047 |
| aplnr2 | 0.114 | emx2 | -0.047 |
| loxl4 | 0.112 | ackr3b | -0.046 |
| pdlim4 | 0.111 | mn1a | -0.046 |
| c1qtnf12 | 0.111 | klf2a | -0.046 |
| hoxc6b | 0.111 | dlx6a | -0.046 |