| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| vcana | 0.229 | krt91 | -0.148 |
| hoxb10a | 0.216 | krtt1c19e | -0.138 |
| hoxb7a | 0.215 | si:dkey-33c14.3 | -0.132 |
| cdx4 | 0.213 | krt5 | -0.128 |
| LOC101882251 | 0.207 | capns1a | -0.128 |
| BX005254.3 | 0.193 | anxa1a | -0.126 |
| hoxd12a | 0.193 | rbp4 | -0.125 |
| sp8b | 0.193 | col1a1b | -0.124 |
| ccdc3a | 0.190 | cxl34b.11 | -0.120 |
| mllt3 | 0.190 | gapdhs | -0.117 |
| hoxb9a | 0.184 | zgc:136930 | -0.117 |
| hoxd10a | 0.183 | anxa2a | -0.112 |
| hoxa10b | 0.182 | si:dkey-183i3.5 | -0.112 |
| hoxc8a | 0.181 | col1a2 | -0.110 |
| apoc1 | 0.180 | eef1da | -0.109 |
| apela | 0.179 | aqp3a | -0.107 |
| insl5a | 0.178 | col14a1b | -0.107 |
| hoxd9a | 0.177 | lgals1l1 | -0.107 |
| emx2 | 0.173 | wu:fa03e10 | -0.102 |
| tpm4a | 0.169 | cotl1 | -0.102 |
| hoxc3a | 0.167 | rplp2 | -0.102 |
| sp8a | 0.165 | epgn | -0.101 |
| XLOC-042222 | 0.165 | sparc | -0.101 |
| tmeff1b | 0.165 | ak1 | -0.100 |
| hoxc6b | 0.165 | col1a1a | -0.100 |
| rgs3a | 0.162 | s100a10b | -0.099 |
| hoxd3a | 0.158 | si:ch211-39i22.1 | -0.094 |
| tspan7 | 0.158 | postnb | -0.094 |
| sp6 | 0.157 | col17a1a | -0.093 |
| hoxa11b | 0.157 | tmsb1 | -0.093 |
| hoxa9b | 0.156 | zgc:77439 | -0.092 |
| hoxc11b | 0.154 | wu:fb18f06 | -0.092 |
| crabp2a | 0.153 | si:ch211-105c13.3 | -0.089 |
| sp9 | 0.149 | aep1 | -0.089 |
| spry4 | 0.147 | krt4 | -0.088 |