| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.109 | cyt1 | -0.070 |
| cx43.4 | 0.100 | krt4 | -0.069 |
| nucks1a | 0.098 | icn | -0.068 |
| raraa | 0.098 | cyt1l | -0.066 |
| hoxc3a | 0.095 | anxa1a | -0.065 |
| hoxb1b | 0.093 | si:ch211-195b11.3 | -0.065 |
| hoxb3a | 0.089 | wu:fb18f06 | -0.065 |
| marcksb | 0.085 | icn2 | -0.064 |
| sp5l | 0.084 | krt5 | -0.064 |
| acin1a | 0.083 | krtt1c19e | -0.063 |
| hoxb7a | 0.083 | pycard | -0.062 |
| seta | 0.083 | zgc:193505 | -0.061 |
| si:ch211-288g17.3 | 0.083 | agr1 | -0.060 |
| hdac1 | 0.082 | krt17 | -0.060 |
| hnrnpa0a | 0.082 | mgst1.2 | -0.060 |
| hp1bp3 | 0.082 | s100a10b | -0.060 |
| anp32e | 0.081 | anxa1c | -0.059 |
| hnrnpub | 0.080 | zgc:153284 | -0.059 |
| hoxb9a | 0.080 | tmsb1 | -0.058 |
| ilf3b | 0.080 | pnp5a | -0.057 |
| rbm4.3 | 0.080 | selenow2b | -0.057 |
| hoxb10a | 0.080 | anxa2a | -0.056 |
| hoxc8a | 0.078 | hrc | -0.056 |
| chd7 | 0.077 | tcnbb | -0.056 |
| hspb1 | 0.077 | cldne | -0.055 |
| smarca4a | 0.077 | scel | -0.055 |
| chd4b | 0.076 | wu:fa03e10 | -0.055 |
| hnrnpa1b | 0.076 | cfl1l | -0.054 |
| hoxc4a | 0.076 | cldnb | -0.054 |
| ewsr1a | 0.075 | fbp1a | -0.054 |
| ilf2 | 0.075 | lye | -0.054 |
| hnrnpa1a | 0.074 | s100v1 | -0.054 |
| BX005254.3 | 0.073 | si:ch211-105c13.3 | -0.054 |
| apela | 0.072 | si:ch211-157c3.4 | -0.054 |
| hoxc6b | 0.072 | aep1 | -0.053 |