| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pitx2 | 0.320 | meis1b | -0.049 |
| gja8b | 0.285 | fabp7a | -0.043 |
| foxe3 | 0.276 | mdka | -0.042 |
| CR356246.1 | 0.235 | fabp3 | -0.040 |
| LOC110438076 | 0.226 | hoxb3a | -0.040 |
| FO681288.1 | 0.217 | gas1b | -0.037 |
| si:ch211-219a15.3 | 0.215 | si:ch211-137a8.4 | -0.037 |
| slc7a11 | 0.202 | hoxc3a | -0.035 |
| col28a1b | 0.201 | znf503 | -0.035 |
| cps1 | 0.196 | meis2b | -0.035 |
| sparcl1 | 0.189 | mdkb | -0.033 |
| prox2 | 0.186 | sp8b | -0.030 |
| crybb1 | 0.174 | rorb | -0.030 |
| gja8a | 0.166 | pax3a | -0.029 |
| lim2.1 | 0.163 | rhbg | -0.029 |
| BFSP1 | 0.157 | hoxb1b | -0.028 |
| lmx1ba | 0.153 | krtt1c19e | -0.028 |
| cryba2a | 0.152 | wu:fa03e10 | -0.028 |
| pitx1 | 0.151 | sb:cb81 | -0.027 |
| cx23 | 0.150 | cadm3 | -0.026 |
| dmrta2 | 0.148 | col1a1b | -0.026 |
| scinla | 0.148 | hoxb9a | -0.026 |
| cryba1l1 | 0.144 | hoxd3a | -0.026 |
| si:dkey-164f24.2 | 0.143 | hoxd4a | -0.026 |
| cryba4 | 0.139 | en2b | -0.025 |
| otc | 0.139 | hoxa3a | -0.025 |
| mipb | 0.134 | hoxc9a | -0.025 |
| tkta | 0.133 | mab21l1 | -0.025 |
| tubb6 | 0.130 | six6b | -0.025 |
| lmx1bb | 0.126 | meis2a | -0.025 |
| cryba1b | 0.125 | draxin | -0.024 |
| gja3 | 0.125 | gfap | -0.024 |
| col4a3 | 0.124 | hoxb7a | -0.024 |
| mgarp | 0.119 | pycard | -0.024 |
| col28a1a | 0.118 | rgcc | -0.024 |