| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax3a | 0.391 | atp5if1b | -0.151 |
| XLOC-003690 | 0.391 | tmsb1 | -0.151 |
| mdka | 0.373 | cfl1l | -0.143 |
| sox3 | 0.367 | s100a10b | -0.141 |
| XLOC-003689 | 0.366 | pfn1 | -0.138 |
| notch3 | 0.358 | anxa1a | -0.137 |
| cldn5a | 0.347 | krt4 | -0.137 |
| gfap | 0.341 | pycard | -0.137 |
| id1 | 0.340 | epcam | -0.136 |
| plp1a | 0.338 | krt5 | -0.135 |
| sb:cb81 | 0.330 | icn | -0.133 |
| si:ch73-21g5.7 | 0.326 | cyt1 | -0.132 |
| her15.1 | 0.325 | krtt1c19e | -0.132 |
| her12 | 0.321 | wu:fb18f06 | -0.129 |
| her2 | 0.320 | ier2b | -0.126 |
| boc | 0.318 | anxa2a | -0.125 |
| lfng | 0.317 | cebpb | -0.124 |
| nrarpb | 0.311 | gng3 | -0.123 |
| sox19a | 0.308 | cd9b | -0.122 |
| her8a | 0.302 | zgc:153284 | -0.120 |
| zgc:165461 | 0.293 | lgals3b | -0.119 |
| XLOC-003692 | 0.291 | s100v1 | -0.119 |
| her4.1 | 0.283 | capns1a | -0.117 |
| her4.2 | 0.281 | stmn1b | -0.117 |
| si:ch211-212k18.5 | 0.278 | zgc:175088 | -0.117 |
| gpm6bb | 0.273 | prr13 | -0.116 |
| msi1 | 0.272 | sncb | -0.116 |
| abhd6a | 0.269 | arhgef5 | -0.115 |
| notch1b | 0.261 | arhgdig | -0.114 |
| sox19b | 0.260 | cldnb | -0.114 |
| mir219-3 | 0.258 | si:ch211-195b11.3 | -0.114 |
| msna | 0.247 | foxq1a | -0.113 |
| tspan7 | 0.246 | wu:fa03e10 | -0.113 |
| lrrn1 | 0.245 | cyt1l | -0.112 |
| slc1a3a | 0.241 | krt91 | -0.112 |