| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sox3 | 0.220 | krt8 | -0.144 |
| XLOC-003690 | 0.219 | krt18a.1 | -0.143 |
| sox19a | 0.177 | cd63 | -0.106 |
| pax3a | 0.175 | ucmab | -0.104 |
| sb:cb81 | 0.173 | si:ch73-23l24.1 | -0.102 |
| XLOC-003689 | 0.168 | zgc:113232 | -0.102 |
| si:ch211-222l21.1 | 0.168 | zgc:174153 | -0.101 |
| her15.1 | 0.167 | col9a2 | -0.100 |
| crb2a | 0.167 | col9a1b | -0.100 |
| her12 | 0.166 | matn3a | -0.100 |
| hes6 | 0.165 | col2a1a | -0.100 |
| khdrbs1a | 0.163 | cmn | -0.098 |
| sp5l | 0.163 | selenom | -0.097 |
| hnrnpaba | 0.161 | krt5 | -0.096 |
| hnrnpabb | 0.161 | epyc | -0.096 |
| her4.1 | 0.158 | ctslb | -0.096 |
| hnrnpa0b | 0.157 | col11a1a | -0.095 |
| abhd6a | 0.157 | sparc | -0.095 |
| ssrp1a | 0.157 | col9a3 | -0.095 |
| XLOC-003692 | 0.157 | pitx2 | -0.094 |
| her4.2 | 0.156 | cnmd | -0.094 |
| marcksb | 0.155 | si:ch211-243g18.2 | -0.094 |
| hdac1 | 0.154 | zmp:0000000760 | -0.093 |
| gfap | 0.154 | si:dkey-269i1.4 | -0.092 |
| si:dkey-42i9.4 | 0.153 | si:dkey-31g6.6 | -0.092 |
| sox2 | 0.152 | si:dkey-239j18.2 | -0.091 |
| si:ch73-21g5.7 | 0.152 | col11a2 | -0.091 |
| cbx3a | 0.151 | cavin2b | -0.090 |
| si:ch211-288g17.3 | 0.149 | chad | -0.090 |
| smarcd1 | 0.149 | fzd8b | -0.090 |
| ddx39ab | 0.148 | klf17 | -0.089 |
| stmn1a | 0.148 | pleca | -0.089 |
| alyref | 0.148 | atp5if1b | -0.087 |
| h2afvb | 0.148 | matn3b | -0.085 |
| nono | 0.147 | sec61g | -0.084 |