| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd12a | 0.266 | capns1a | -0.097 |
| hoxb10a | 0.266 | anxa1a | -0.095 |
| hoxb7a | 0.245 | s100a10b | -0.087 |
| hoxd10a | 0.220 | col1a1b | -0.086 |
| hoxc11b | 0.216 | krt91 | -0.085 |
| nkx1.2la | 0.215 | anxa2a | -0.081 |
| hoxa10b | 0.212 | cotl1 | -0.080 |
| sp8b | 0.209 | sparc | -0.079 |
| cdx4 | 0.208 | aqp3a | -0.077 |
| hoxa11b | 0.201 | rplp2 | -0.076 |
| BX005254.3 | 0.200 | capgb | -0.076 |
| hoxb9a | 0.197 | gapdhs | -0.076 |
| sp5l | 0.195 | krtt1c19e | -0.075 |
| apela | 0.194 | postnb | -0.074 |
| LOC101882251 | 0.194 | eef1da | -0.073 |
| insl5a | 0.187 | col1a2 | -0.072 |
| ccdc3a | 0.186 | cxl34b.11 | -0.071 |
| hoxd9a | 0.186 | col4a6 | -0.070 |
| rgs3a | 0.185 | s100v1 | -0.070 |
| hoxa9b | 0.184 | tmsb1 | -0.069 |
| hoxd11a | 0.184 | rbp4 | -0.068 |
| emx3 | 0.183 | itgb4 | -0.067 |
| hoxc8a | 0.177 | aldh9a1a.1 | -0.067 |
| cdaa | 0.173 | col1a1a | -0.066 |
| vcana | 0.173 | col14a1b | -0.066 |
| hoxa9a | 0.173 | si:dkey-33c14.3 | -0.065 |
| hoxc6b | 0.170 | col4a5 | -0.064 |
| mllt3 | 0.170 | si:ch211-39i22.1 | -0.064 |
| apoc1 | 0.166 | epgn | -0.063 |
| hoxc11a | 0.165 | rps29 | -0.063 |
| hoxc3a | 0.163 | cldn1 | -0.063 |
| crabp2a | 0.162 | hbegfa | -0.063 |
| hoxd13a | 0.156 | aep1 | -0.061 |
| emx2 | 0.153 | zgc:136930 | -0.061 |
| hoxc10a | 0.153 | krt5 | -0.060 |