Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ece1 | 0.148 | fabp3 | -0.067 |
| LOC110439323 | 0.136 | actc1b | -0.061 |
| msgn1 | 0.129 | bhmt | -0.060 |
| her1 | 0.125 | sparc | -0.055 |
| tbx16l | 0.118 | ckma | -0.055 |
| hoxd10a | 0.118 | COX3 | -0.054 |
| hoxb10a | 0.116 | ttn.2 | -0.053 |
| itm2cb | 0.115 | ckmb | -0.053 |
| dgkb | 0.111 | atp2a1 | -0.052 |
| BX005254.3 | 0.109 | eef1da | -0.052 |
| BX511166.1 | 0.109 | ak1 | -0.052 |
| apoc1 | 0.106 | pabpc4 | -0.051 |
| her7 | 0.105 | mylpfa | -0.050 |
| fn1b | 0.104 | aldoab | -0.050 |
| hes6 | 0.104 | eno1a | -0.050 |
| her12 | 0.102 | pmp22a | -0.049 |
| XLOC-039166 | 0.100 | col1a2 | -0.049 |
| hoxa11a | 0.098 | gamt | -0.049 |
| pcdh8 | 0.096 | tmem38a | -0.048 |
| hoxc11a | 0.094 | tnnc2 | -0.048 |
| XLOC-038909 | 0.092 | pvalb1 | -0.048 |
| hoxa11b | 0.092 | gapdh | -0.048 |
| cx43.4 | 0.090 | si:dkey-16p21.8 | -0.047 |
| LOC101882020 | 0.089 | pvalb2 | -0.047 |
| LOC100001908 | 0.089 | desma | -0.047 |
| nid2a | 0.087 | col1a1a | -0.047 |
| apoeb | 0.085 | neb | -0.047 |
| LOC110438146 | 0.083 | ndrg2 | -0.047 |
| dlc | 0.082 | acta1b | -0.046 |
| myf5 | 0.082 | tnnt3a | -0.046 |
| hoxd12a | 0.081 | nme2b.2 | -0.046 |
| hoxb7a | 0.081 | mylz3 | -0.046 |
| ybx1 | 0.081 | tpma | -0.046 |
| efnb2b | 0.080 | ldb3b | -0.045 |
| gnaia | 0.080 | si:ch211-140m22.7 | -0.045 |