Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msgn1 | 0.184 | fabp3 | -0.051 |
| myf5 | 0.170 | tuba1c | -0.048 |
| her1 | 0.165 | pvalb1 | -0.043 |
| tbx16l | 0.160 | pvalb2 | -0.042 |
| tbx6 | 0.156 | prdx2 | -0.041 |
| im:7138239 | 0.140 | gpm6aa | -0.040 |
| her7 | 0.139 | nova2 | -0.040 |
| ripply2 | 0.138 | elavl3 | -0.038 |
| tcf15 | 0.137 | rtn1a | -0.038 |
| XLOC-039166 | 0.132 | calm1a | -0.038 |
| znfl1k | 0.125 | hbbe1.3 | -0.037 |
| tbx16 | 0.121 | stmn1b | -0.037 |
| hspb1 | 0.120 | marcksl1a | -0.037 |
| apoc1 | 0.119 | ckbb | -0.036 |
| BX276101.1 | 0.118 | gapdhs | -0.036 |
| XLOC-042229 | 0.118 | mdkb | -0.036 |
| meox1 | 0.117 | celf2 | -0.034 |
| mespab | 0.115 | hbae3 | -0.034 |
| BX001014.2 | 0.114 | krt4 | -0.034 |
| fgf17 | 0.114 | rnasekb | -0.033 |
| LOC110438394 | 0.113 | tmsb | -0.033 |
| cdx4 | 0.112 | tuba1a | -0.033 |
| LOC110439323 | 0.112 | wu:fb55g09 | -0.033 |
| nid2a | 0.110 | cyt1 | -0.032 |
| wu:fb97g03 | 0.110 | gpm6ab | -0.032 |
| ripply1 | 0.109 | hbae1.1 | -0.032 |
| hsp90aa1.1 | 0.107 | fabp7a | -0.031 |
| BX005254.3 | 0.106 | icn | -0.031 |
| BX927258.1 | 0.105 | cyt1l | -0.030 |
| fn1b | 0.105 | epb41a | -0.030 |
| sp5l | 0.105 | ccni | -0.029 |
| XLOC-004280 | 0.104 | eif4a1b | -0.029 |
| mespaa | 0.103 | foxp4 | -0.029 |
| XLOC-018346 | 0.103 | gng3 | -0.029 |
| snai1a | 0.102 | atp6v1e1b | -0.028 |