Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ece1 | 0.215 | COX3 | -0.134 |
| msgn1 | 0.211 | fabp3 | -0.132 |
| fn1b | 0.195 | bhmt | -0.127 |
| nid2a | 0.192 | actc1b | -0.114 |
| apoc1 | 0.190 | ckma | -0.110 |
| tbx16l | 0.186 | mt-co2 | -0.110 |
| her1 | 0.183 | ckmb | -0.108 |
| XLOC-039166 | 0.182 | atp2a1 | -0.107 |
| her7 | 0.174 | eef1da | -0.106 |
| cx43.4 | 0.166 | ndrg2 | -0.103 |
| nop53 | 0.163 | pvalb1 | -0.103 |
| efnb2b | 0.162 | pabpc4 | -0.103 |
| hes6 | 0.161 | pvalb2 | -0.102 |
| tbx6 | 0.161 | mylpfa | -0.102 |
| hoxd10a | 0.160 | si:dkey-16p21.8 | -0.101 |
| myf5 | 0.160 | sparc | -0.100 |
| pcdh8 | 0.159 | tnnt3a | -0.099 |
| hoxb10a | 0.155 | col1a2 | -0.099 |
| ddx21 | 0.154 | ak1 | -0.099 |
| itm2cb | 0.154 | mylz3 | -0.098 |
| cpne4b | 0.153 | gamt | -0.098 |
| BX005254.3 | 0.152 | pmp22a | -0.097 |
| dgkb | 0.151 | nme2b.2 | -0.095 |
| LOC110439323 | 0.151 | neb | -0.094 |
| gnaia | 0.150 | si:ch73-367p23.2 | -0.094 |
| si:ch211-217k17.7 | 0.150 | ttn.2 | -0.094 |
| eef1a1l1 | 0.149 | aldoab | -0.094 |
| akt1s1 | 0.149 | col1a1a | -0.094 |
| ripply2 | 0.148 | ank1a | -0.093 |
| si:ch73-281n10.2 | 0.147 | gapdh | -0.093 |
| rsl1d1 | 0.146 | ldb3b | -0.092 |
| tuba8l2 | 0.144 | tmem38a | -0.091 |
| draxin | 0.143 | atp5l | -0.091 |
| gtpbp4 | 0.143 | hbbe1.3 | -0.091 |
| XLOC-018346 | 0.143 | myl1 | -0.091 |