Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| twist2 | 0.188 | krt8 | -0.141 |
| foxa | 0.186 | col11a2 | -0.125 |
| insb | 0.184 | epyc | -0.124 |
| nog1 | 0.171 | si:ch73-23l24.1 | -0.118 |
| fadd | 0.165 | ucmab | -0.115 |
| efnb2b | 0.162 | rpl37 | -0.115 |
| hspb1 | 0.159 | krt18a.1 | -0.115 |
| LOC103912072 | 0.154 | zgc:113232 | -0.114 |
| dhrs3b | 0.148 | matn3a | -0.113 |
| kirrel3l | 0.144 | zgc:114188 | -0.113 |
| ppp1r14c | 0.140 | rps17 | -0.109 |
| pak1 | 0.139 | rps10 | -0.108 |
| large2 | 0.137 | sparc | -0.108 |
| cdx4 | 0.136 | col9a1b | -0.106 |
| hnrnpl | 0.136 | zmp:0000000760 | -0.106 |
| hmga1a | 0.135 | zgc:158463 | -0.105 |
| foxa2 | 0.134 | krt5 | -0.104 |
| ilf3b | 0.134 | rgcc | -0.104 |
| noto | 0.132 | matn3b | -0.103 |
| notch1a | 0.129 | col9a2 | -0.103 |
| akap12b | 0.128 | nme2b.1 | -0.102 |
| hnrnpa1a | 0.126 | gas2b | -0.102 |
| XLOC-014747 | 0.126 | col9a3 | -0.100 |
| sp5l | 0.126 | col2a1a | -0.099 |
| nid2a | 0.125 | foxp4 | -0.098 |
| LOC110439827 | 0.124 | snorc | -0.098 |
| epha4a | 0.124 | mmp23bb | -0.098 |
| COLGALT1 | 0.123 | chad | -0.097 |
| rtca | 0.123 | si:dkey-31g6.6 | -0.097 |
| rnaseka | 0.123 | ctgfa | -0.097 |
| lrrc59 | 0.122 | wfdc2 | -0.097 |
| p4ha2 | 0.122 | cmn | -0.096 |
| rnft2 | 0.122 | ehd2b | -0.092 |
| aplnra | 0.122 | tppp3 | -0.091 |
| hmgn6 | 0.121 | susd5 | -0.090 |