| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkey-208c12.2 | 0.393 | cyt1l | -0.052 |
| foxa | 0.345 | krtt1c19e | -0.051 |
| shha | 0.338 | mab21l1 | -0.050 |
| shhb | 0.295 | cyt1 | -0.049 |
| foxa1 | 0.280 | tfap2a | -0.049 |
| ntn1b | 0.204 | aep1 | -0.047 |
| urp2 | 0.190 | mab21l2 | -0.047 |
| sox32 | 0.189 | snap25b | -0.044 |
| foxa3 | 0.174 | krt5 | -0.043 |
| spon1b | 0.173 | wu:fa03e10 | -0.043 |
| sox17 | 0.170 | hbae1.1 | -0.041 |
| aplnr2 | 0.167 | hbae3 | -0.041 |
| insb | 0.165 | hbbe1.3 | -0.041 |
| lft2 | 0.165 | hbbe2 | -0.041 |
| col8a1a | 0.153 | krt17 | -0.041 |
| noto | 0.153 | msx1b | -0.041 |
| scospondin | 0.150 | DSG2 | -0.040 |
| ldlrad2 | 0.143 | hbbe1.1 | -0.039 |
| loxl5b | 0.143 | pvalb1 | -0.039 |
| bicc2 | 0.142 | zgc:174938 | -0.039 |
| nkx2.2b | 0.141 | abcb5 | -0.038 |
| ndr2 | 0.136 | mdka | -0.038 |
| tbata | 0.136 | pax6a | -0.038 |
| tbxta | 0.136 | pvalb2 | -0.038 |
| admp | 0.130 | tcnbb | -0.038 |
| sparcl1 | 0.127 | hbae1.3 | -0.037 |
| oc90 | 0.126 | icn2 | -0.037 |
| nkx6.2 | 0.119 | klf2b | -0.037 |
| sulf1 | 0.119 | si:dkey-222n6.2 | -0.037 |
| dmrta2 | 0.118 | actc1b | -0.036 |
| ntn1a | 0.117 | cst14b.1 | -0.036 |
| plod2 | 0.116 | gas1b | -0.036 |
| si:ch211-27e6.1 | 0.115 | pax3a | -0.036 |
| cyr61l2 | 0.112 | si:ch211-125o16.4 | -0.036 |
| wnt4b | 0.112 | si:ch73-52f15.5 | -0.036 |