forkhead box A1
ZFIN 
Gene expression UMAP
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shha | 0.326 | mab21l1 | -0.044 |
| foxa2 | 0.280 | mab21l2 | -0.042 |
| si:dkey-208c12.2 | 0.259 | mdkb | -0.042 |
| col8a1a | 0.243 | ckbb | -0.040 |
| foxa3 | 0.212 | cadm3 | -0.039 |
| shhb | 0.209 | gas1b | -0.039 |
| foxa | 0.199 | boc | -0.038 |
| col9a1b | 0.181 | gpm6ab | -0.036 |
| loxl5b | 0.174 | mdka | -0.036 |
| cmn | 0.173 | pax3a | -0.036 |
| zmp:0000000760 | 0.170 | meis2b | -0.036 |
| lcn15 | 0.167 | gas1a | -0.035 |
| ntn1b | 0.165 | anp32e | -0.034 |
| zgc:113232 | 0.165 | si:ch211-137a8.4 | -0.034 |
| matn3b | 0.163 | snap25b | -0.034 |
| BX908782.3 | 0.160 | tfap2a | -0.034 |
| si:ch73-23l24.1 | 0.160 | msx1b | -0.033 |
| gas2b | 0.159 | pax6a | -0.033 |
| fxyd1 | 0.157 | stmn1b | -0.033 |
| si:dkey-234i14.3 | 0.155 | hmgb1b | -0.032 |
| scospondin | 0.153 | celf2 | -0.031 |
| chadla | 0.151 | crabp2b | -0.031 |
| susd5 | 0.150 | rorb | -0.031 |
| paqr4b | 0.148 | pax6b | -0.030 |
| si:ch211-106h4.6 | 0.148 | foxg1b | -0.029 |
| si:ch211-13f8.2 | 0.148 | ndrg4 | -0.029 |
| ihha | 0.147 | pou5f3 | -0.029 |
| spon1b | 0.147 | wu:fa03e10 | -0.029 |
| cldnc | 0.146 | zic2b | -0.029 |
| slit1b | 0.144 | actc1b | -0.028 |
| b4galnt3b | 0.143 | aep1 | -0.028 |
| cers3b | 0.143 | atp6v0cb | -0.028 |
| itpr3 | 0.143 | elavl3 | -0.028 |
| agr2 | 0.140 | epb41a | -0.028 |
| aplnr2 | 0.138 | krtt1c19e | -0.028 |