forkhead box A1
ZFIN 
Gene expression UMAP
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shha | 0.539 | ptmaa | -0.138 |
| shhb | 0.484 | elavl3 | -0.110 |
| slit1b | 0.447 | hoxb9a | -0.105 |
| clu | 0.424 | ckbb | -0.099 |
| spon1b | 0.423 | mdkb | -0.098 |
| arxa | 0.423 | hoxb8a | -0.097 |
| foxa2 | 0.407 | gas1b | -0.097 |
| ntn1b | 0.396 | cadm3 | -0.095 |
| ctgfa | 0.393 | pax3a | -0.094 |
| vasna | 0.389 | stmn1b | -0.092 |
| si:dkey-208c12.2 | 0.388 | hoxb3a | -0.091 |
| myl9a | 0.383 | fabp3 | -0.090 |
| col9a3 | 0.368 | tmsb4x | -0.089 |
| aplnr2 | 0.366 | gng3 | -0.088 |
| npr3 | 0.366 | myt1b | -0.088 |
| trabd2b | 0.360 | rtn1a | -0.088 |
| col8a1a | 0.357 | tmeff1b | -0.087 |
| slit2 | 0.355 | si:ch211-251b21.1 | -0.087 |
| tmem88b | 0.352 | meis1b | -0.085 |
| foxa | 0.343 | gpm6ab | -0.085 |
| sulf1 | 0.336 | elavl4 | -0.084 |
| optc | 0.331 | stx1b | -0.084 |
| lcn15 | 0.326 | ptmab | -0.084 |
| ptgs2a | 0.318 | sp8b | -0.084 |
| scospondin | 0.318 | stxbp1a | -0.082 |
| cyr61l2 | 0.315 | hoxd3a | -0.082 |
| spon2a | 0.314 | vim | -0.079 |
| fxyd1 | 0.313 | vamp2 | -0.079 |
| sparcl1 | 0.308 | sncb | -0.079 |
| col9a2 | 0.293 | tmsb | -0.079 |
| BX908782.3 | 0.290 | snap25a | -0.077 |
| zgc:162730 | 0.286 | cplx2 | -0.075 |
| loxl5b | 0.282 | hoxc3a | -0.075 |
| r3hdml | 0.272 | ywhah | -0.074 |
| col9a1b | 0.264 | pax6a | -0.074 |