| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tfap2b | 0.385 | cldn5a | -0.111 |
| kctd15a | 0.304 | msna | -0.110 |
| tfap2c | 0.284 | msi1 | -0.093 |
| tfap2e | 0.281 | XLOC-003690 | -0.090 |
| pax10 | 0.223 | cd81a | -0.086 |
| dlx3b | 0.197 | sox3 | -0.085 |
| KCTD15 | 0.183 | XLOC-003689 | -0.084 |
| cyt1 | 0.180 | mdka | -0.082 |
| cyt1l | 0.177 | dut | -0.081 |
| cfl1l | 0.173 | gas1b | -0.080 |
| epcam | 0.173 | gfap | -0.080 |
| krt4 | 0.171 | her2 | -0.078 |
| zgc:175088 | 0.166 | sox19a | -0.078 |
| krt5 | 0.165 | pcna | -0.077 |
| krtt1c19e | 0.163 | jam3b | -0.076 |
| si:ch211-166a6.5 | 0.162 | ccna2 | -0.075 |
| aep1 | 0.161 | sb:cb81 | -0.074 |
| ywhaz | 0.160 | rrm2 | -0.070 |
| arhgef5 | 0.159 | lbr | -0.069 |
| gsnb | 0.159 | her12 | -0.068 |
| XLOC-023447 | 0.158 | cpn1 | -0.067 |
| tp63 | 0.156 | ptch2 | -0.067 |
| myh9a | 0.151 | si:ch73-21g5.7 | -0.067 |
| cdh1 | 0.148 | tbx16 | -0.067 |
| wu:fb18f06 | 0.148 | notch1b | -0.066 |
| mid1ip1a | 0.147 | her4.2 | -0.066 |
| foxi1 | 0.146 | nrarpb | -0.065 |
| cd9b | 0.145 | plp1a | -0.065 |
| DSG2 | 0.144 | rrm1 | -0.065 |
| esrp1 | 0.144 | notch3 | -0.064 |
| s100a10b | 0.144 | rpa3 | -0.064 |
| pkp3a | 0.143 | ntn1a | -0.063 |
| fut9d | 0.142 | si:ch211-212k18.5 | -0.063 |
| tmsb1 | 0.142 | sox19b | -0.063 |
| wu:fa03e10 | 0.142 | fabp7a | -0.062 |