| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkey-208c12.2 | 0.394 | meis1b | -0.056 |
| lft2 | 0.224 | mdka | -0.054 |
| foxa1 | 0.199 | mab21l1 | -0.050 |
| foxa | 0.193 | mab21l2 | -0.047 |
| shhb | 0.173 | meis2b | -0.047 |
| sox32 | 0.168 | gas1b | -0.046 |
| sox17 | 0.151 | rps10 | -0.045 |
| foxd2 | 0.136 | rplp1 | -0.044 |
| nr4a2b | 0.127 | rpl37 | -0.043 |
| lft1 | 0.125 | zgc:56493 | -0.043 |
| dmrta2 | 0.125 | dut | -0.042 |
| pitx3 | 0.119 | pax3a | -0.041 |
| pitx2 | 0.114 | ahcy | -0.040 |
| emx2 | 0.111 | her2 | -0.040 |
| shha | 0.108 | lhx9 | -0.040 |
| gnrh2 | 0.104 | rps17 | -0.040 |
| nkx1.2la | 0.103 | boc | -0.040 |
| gata5 | 0.100 | hoxb3a | -0.040 |
| nkx6.2 | 0.095 | fabp7a | -0.039 |
| nkx2.9 | 0.094 | fabp3 | -0.037 |
| ndr2 | 0.092 | zgc:114188 | -0.037 |
| sparcl1 | 0.090 | rplp0 | -0.037 |
| tac1 | 0.089 | rpl22l1 | -0.037 |
| sim1a | 0.084 | znf503 | -0.037 |
| foxa3 | 0.080 | sox3 | -0.036 |
| insb | 0.076 | zic1 | -0.036 |
| aplnr2 | 0.075 | si:dkey-151g10.6 | -0.036 |
| admp | 0.072 | nutf2l | -0.035 |
| uts1 | 0.072 | rrm2 | -0.034 |
| dact2 | 0.070 | sp8b | -0.034 |
| pltp | 0.070 | pax7a | -0.034 |
| ptx3a | 0.068 | gas1a | -0.034 |
| uncx | 0.067 | rps23 | -0.033 |
| noto | 0.066 | rps24 | -0.033 |
| kcnk13b | 0.066 | pax6a | -0.033 |