Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msgn1 | 0.128 | tuba1c | -0.038 |
| mespab | 0.122 | fabp3 | -0.036 |
| tbx16 | 0.111 | gpm6aa | -0.033 |
| im:7138239 | 0.105 | nova2 | -0.033 |
| BX511166.1 | 0.103 | pvalb1 | -0.033 |
| myf5 | 0.103 | pvalb2 | -0.032 |
| tbx16l | 0.101 | marcksl1a | -0.032 |
| wu:fb97g03 | 0.097 | mdkb | -0.031 |
| her7 | 0.096 | prdx2 | -0.031 |
| ripply2 | 0.094 | calm1a | -0.031 |
| hspb1 | 0.091 | elavl3 | -0.030 |
| tbx6 | 0.089 | hbbe1.3 | -0.030 |
| tbxta | 0.089 | rtn1a | -0.030 |
| her1 | 0.088 | ckbb | -0.029 |
| XLOC-039166 | 0.087 | gapdhs | -0.029 |
| fgf17 | 0.086 | stmn1b | -0.029 |
| snai1a | 0.086 | hbae3 | -0.028 |
| sp5l | 0.085 | rnasekb | -0.028 |
| tcf15 | 0.085 | celf2 | -0.027 |
| XLOC-007771 | 0.085 | wu:fb55g09 | -0.027 |
| mespaa | 0.084 | hbae1.1 | -0.026 |
| XLOC-041707 | 0.083 | gpm6ab | -0.025 |
| apoc1 | 0.082 | tmsb | -0.025 |
| si:dkeyp-2e4.3 | 0.082 | atp6v1e1b | -0.024 |
| cdx4 | 0.079 | ccni | -0.024 |
| vox | 0.077 | epb41a | -0.024 |
| BX927258.1 | 0.076 | gng3 | -0.024 |
| lft1 | 0.075 | tuba1a | -0.024 |
| meox1 | 0.075 | atp6v0cb | -0.023 |
| znfl1k | 0.075 | cspg5a | -0.023 |
| BX001014.2 | 0.074 | fabp7a | -0.023 |
| LOC110438146 | 0.074 | fam168a | -0.023 |
| BX276101.1 | 0.073 | hbbe1.1 | -0.023 |
| vrtn | 0.073 | sncb | -0.023 |
| LOC110439323 | 0.072 | foxp4 | -0.022 |