Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx16 | 0.242 | tuba1c | -0.074 |
| tbxta | 0.219 | gapdhs | -0.069 |
| wu:fb97g03 | 0.213 | calm1a | -0.069 |
| si:dkeyp-2e4.3 | 0.207 | gpm6aa | -0.068 |
| mespab | 0.206 | ccni | -0.065 |
| im:7138239 | 0.188 | hbbe1.3 | -0.065 |
| insb | 0.187 | pvalb1 | -0.065 |
| wnt11f2 | 0.186 | rnasekb | -0.064 |
| hspb1 | 0.184 | rtn1a | -0.064 |
| LOC100008030 | 0.184 | pvalb2 | -0.063 |
| ndr2 | 0.180 | stmn1b | -0.062 |
| vrtn | 0.180 | fabp3 | -0.061 |
| BX927327.1 | 0.175 | hbae3 | -0.061 |
| lft1 | 0.169 | nova2 | -0.061 |
| msgn1 | 0.169 | atp6v0cb | -0.060 |
| sp5l | 0.169 | mdkb | -0.060 |
| foxa | 0.164 | ckbb | -0.059 |
| snai1a | 0.163 | elavl3 | -0.059 |
| si:dkey-261j4.5 | 0.161 | hbae1.1 | -0.058 |
| ddx4 | 0.156 | marcksl1a | -0.058 |
| XLOC-016582 | 0.155 | gng3 | -0.056 |
| mespaa | 0.152 | atp6v1e1b | -0.055 |
| cdx4 | 0.150 | prdx2 | -0.055 |
| stm | 0.148 | gpm6ab | -0.054 |
| s100a1 | 0.147 | sncb | -0.054 |
| cmtm6 | 0.146 | cyt1 | -0.053 |
| XLOC-015209 | 0.146 | krt4 | -0.053 |
| zgc:56699 | 0.145 | vamp2 | -0.053 |
| FP102169.1 | 0.143 | si:ch1073-429i10.3.1 | -0.053 |
| vox | 0.142 | hbbe1.1 | -0.051 |
| ved | 0.140 | atp6v1g1 | -0.050 |
| akap12b | 0.139 | cspg5a | -0.050 |
| npm1a | 0.138 | elavl4 | -0.050 |
| dkc1 | 0.136 | si:dkeyp-75h12.5 | -0.049 |
| fbl | 0.136 | stx1b | -0.049 |