Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ved | 0.395 | si:ch1073-429i10.3.1 | -0.112 |
| wu:fb97g03 | 0.331 | calm1a | -0.104 |
| eve1 | 0.328 | ccni | -0.101 |
| si:dkey-261j4.5 | 0.317 | gapdhs | -0.094 |
| tbx16 | 0.308 | tuba1c | -0.093 |
| vrtn | 0.297 | gpm6aa | -0.092 |
| cdx1a | 0.284 | marcksl1a | -0.092 |
| cdx4 | 0.282 | rnasekb | -0.091 |
| vox | 0.282 | hbbe1.3 | -0.090 |
| apoc1 | 0.280 | krt4 | -0.088 |
| LOC100008030 | 0.277 | atp6v1g1 | -0.086 |
| LOC108190024 | 0.275 | hbae3 | -0.086 |
| BX927327.1 | 0.274 | rtn1a | -0.086 |
| sp5l | 0.270 | atp6v0cb | -0.085 |
| si:dkeyp-2e4.3 | 0.268 | pvalb1 | -0.085 |
| znfl2a | 0.258 | atp6v1e1b | -0.084 |
| mespab | 0.257 | cyt1 | -0.084 |
| hspb1 | 0.253 | stmn1b | -0.083 |
| add3b | 0.249 | ckbb | -0.082 |
| si:ch211-106e7.2 | 0.246 | pvalb2 | -0.082 |
| bmp7a | 0.242 | zgc:56493 | -0.081 |
| pou5f3 | 0.242 | hbae1.1 | -0.080 |
| si:dkey-66i24.9 | 0.241 | gng3 | -0.077 |
| gata5 | 0.240 | cyt1l | -0.076 |
| im:7138239 | 0.240 | gnb1a | -0.076 |
| szl | 0.238 | elavl3 | -0.075 |
| stm | 0.233 | nova2 | -0.075 |
| apoeb | 0.232 | tob1b | -0.075 |
| ca9 | 0.229 | cct2 | -0.075 |
| s100a1 | 0.226 | fabp3 | -0.074 |
| akap12b | 0.221 | hbbe1.1 | -0.074 |
| tbxta | 0.218 | sncb | -0.074 |
| fbl | 0.216 | wu:fb55g09 | -0.074 |
| vent | 0.215 | atp5if1b | -0.073 |
| wnt11f2 | 0.215 | fam168a | -0.073 |