Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| gata5 | 0.233 | cited4b | -0.165 |
| msgn1 | 0.225 | sox3 | -0.162 |
| tbxta | 0.225 | cxcr4b | -0.132 |
| apoc1 | 0.225 | inka1a | -0.127 |
| efnb2b | 0.216 | nanog | -0.120 |
| FP102169.1 | 0.216 | acp5a | -0.114 |
| sp5a | 0.211 | zgc:173742 | -0.113 |
| znfl2a | 0.209 | asb11 | -0.111 |
| gata6 | 0.208 | spink2.1 | -0.110 |
| cdx4 | 0.207 | glulb | -0.107 |
| eve1 | 0.206 | h1m | -0.106 |
| mespab | 0.200 | mkrn4 | -0.105 |
| dkk1b | 0.197 | shisa2a | -0.104 |
| wu:fb97g03 | 0.195 | stk35l | -0.102 |
| ism1 | 0.191 | ccna1 | -0.101 |
| im:7138239 | 0.190 | cldnd | -0.101 |
| aldh1a2 | 0.184 | blf | -0.100 |
| ved | 0.184 | LOC101885477 | -0.100 |
| kirrel3l | 0.183 | zgc:113424 | -0.094 |
| BX927327.1 | 0.182 | wee2 | -0.092 |
| lhx1a | 0.178 | si:ch211-173m16.2 | -0.092 |
| osr1 | 0.178 | gpatch4 | -0.092 |
| aplnrb | 0.177 | zgc:100951 | -0.091 |
| plekhn1 | 0.174 | rcor1 | -0.090 |
| flrt3 | 0.174 | exd2 | -0.090 |
| hes6 | 0.174 | si:dkey-68o6.5 | -0.090 |
| cyp27c1 | 0.168 | si:ch211-132b12.8 | -0.089 |
| wnt11f2 | 0.168 | gdf3 | -0.089 |
| efna1a | 0.166 | slc16a3 | -0.085 |
| wnt5b | 0.165 | rbm7 | -0.084 |
| efnb2a | 0.163 | h2af1al | -0.084 |
| CR847953.1 | 0.162 | dctpp1 | -0.083 |
| pitx2 | 0.160 | cldng | -0.083 |
| foxa | 0.158 | nasp | -0.082 |
| dusp4 | 0.157 | npc2 | -0.082 |