Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.519 | calm1a | -0.135 |
| h1m | 0.515 | ccni | -0.125 |
| nnr | 0.514 | gapdhs | -0.125 |
| si:ch1073-80i24.3 | 0.493 | rnasekb | -0.125 |
| si:dkeyp-114g9.1 | 0.486 | si:ch1073-429i10.3.1 | -0.125 |
| si:dkey-68o6.5 | 0.481 | tuba1c | -0.123 |
| ccna1 | 0.475 | atp6v0cb | -0.122 |
| cldnd | 0.469 | gpm6aa | -0.120 |
| asb11 | 0.465 | hbbe1.3 | -0.120 |
| pou5f3 | 0.459 | rtn1a | -0.118 |
| zgc:173742 | 0.456 | hbae3 | -0.117 |
| si:ch211-173m16.2 | 0.448 | stmn1b | -0.111 |
| avd | 0.444 | gng3 | -0.109 |
| zgc:56699 | 0.436 | atp6v1e1b | -0.108 |
| si:dkey-228b2.6 | 0.433 | gpm6ab | -0.108 |
| zgc:100951 | 0.433 | hbae1.1 | -0.108 |
| zgc:77118 | 0.428 | atp6v1g1 | -0.107 |
| acp5a | 0.424 | pvalb1 | -0.106 |
| s100a1 | 0.412 | krt4 | -0.105 |
| polr3gla | 0.394 | nova2 | -0.104 |
| mcm6l | 0.391 | sncb | -0.104 |
| BX005461.1 | 0.388 | vamp2 | -0.104 |
| cth1 | 0.380 | pvalb2 | -0.102 |
| pabpc1l | 0.380 | marcksl1a | -0.102 |
| si:ch73-303b9.1 | 0.380 | hbbe1.1 | -0.101 |
| map1lc3c | 0.376 | cyt1 | -0.100 |
| zgc:113424 | 0.375 | atp6ap2 | -0.099 |
| h2af1al | 0.371 | elavl3 | -0.098 |
| tbx16 | 0.361 | ywhag2 | -0.098 |
| si:ch73-160h15.3 | 0.359 | wu:fb55g09 | -0.097 |
| ccne1 | 0.354 | atpv0e2 | -0.096 |
| gdf3 | 0.354 | elavl4 | -0.096 |
| ddx4 | 0.353 | snap25a | -0.096 |
| si:ch73-299h12.3 | 0.352 | olfm1b | -0.095 |
| wee2 | 0.352 | stx1b | -0.095 |