Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.266 | NC-002333.4 | -0.179 |
| thy1 | 0.262 | ybx1 | -0.168 |
| cldnd | 0.256 | ptmab | -0.164 |
| spink2.1 | 0.240 | tbxta | -0.164 |
| ccna1 | 0.240 | eef1a1l1 | -0.159 |
| acp5a | 0.234 | apoc1 | -0.159 |
| mkrn4 | 0.229 | hspb1 | -0.157 |
| zgc:100951 | 0.224 | rps2 | -0.153 |
| h2af1al | 0.223 | cdx4 | -0.153 |
| h1m | 0.222 | hnrnpa0b | -0.152 |
| zgc:113424 | 0.220 | si:ch211-222l21.1 | -0.150 |
| gtf2a1 | 0.217 | hmgn2 | -0.147 |
| glulb | 0.216 | hmgn6 | -0.146 |
| zgc:173742 | 0.211 | rplp1 | -0.144 |
| exd2 | 0.208 | hmga1a | -0.141 |
| cldng | 0.207 | eve1 | -0.140 |
| blf | 0.206 | si:ch73-1a9.3 | -0.140 |
| ctss2.1 | 0.206 | wu:fb97g03 | -0.139 |
| rbm7 | 0.201 | anp32e | -0.137 |
| si:ch211-132b12.8 | 0.200 | hmgb2a | -0.137 |
| epcam | 0.198 | wnt11f2 | -0.134 |
| wee2 | 0.197 | hes6 | -0.134 |
| ccnb1 | 0.196 | akap12b | -0.131 |
| zgc:77118 | 0.195 | marcksl1b | -0.129 |
| rcor1 | 0.188 | si:ch211-152c2.3 | -0.125 |
| si:rp71-45k5.2 | 0.188 | si:ch211-137a8.4 | -0.123 |
| gpatch4 | 0.187 | stm | -0.123 |
| stk35l | 0.186 | rps6 | -0.122 |
| ccnb2 | 0.186 | rplp0 | -0.120 |
| gdf3 | 0.185 | rps12 | -0.120 |
| cited4b | 0.184 | nop2 | -0.117 |
| inka1a | 0.184 | dynll1 | -0.117 |
| FO834825.1 | 0.183 | add3b | -0.116 |
| npc2 | 0.183 | rps4x | -0.116 |
| mknk2a | 0.182 | rpl27 | -0.116 |