Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nnr | 0.542 | calm1a | -0.164 |
| h1m | 0.538 | si:ch1073-429i10.3.1 | -0.155 |
| pou5f3 | 0.531 | ccni | -0.151 |
| si:ch1073-80i24.3 | 0.516 | rnasekb | -0.151 |
| si:dkeyp-114g9.1 | 0.511 | tuba1c | -0.150 |
| nanog | 0.510 | gapdhs | -0.149 |
| si:dkey-68o6.5 | 0.501 | atp6v0cb | -0.147 |
| zgc:56699 | 0.489 | gpm6aa | -0.145 |
| asb11 | 0.484 | hbbe1.3 | -0.144 |
| avd | 0.472 | rtn1a | -0.142 |
| si:dkey-228b2.6 | 0.471 | hbae3 | -0.140 |
| ccna1 | 0.470 | stmn1b | -0.135 |
| s100a1 | 0.470 | atp6v1e1b | -0.132 |
| zgc:173742 | 0.467 | atp6v1g1 | -0.132 |
| cldnd | 0.461 | gng3 | -0.131 |
| si:ch211-173m16.2 | 0.457 | hbae1.1 | -0.130 |
| polr3gla | 0.453 | gpm6ab | -0.129 |
| zgc:77118 | 0.446 | pvalb1 | -0.127 |
| tbx16 | 0.441 | sncb | -0.126 |
| acp5a | 0.425 | vamp2 | -0.126 |
| ddx4 | 0.420 | marcksl1a | -0.126 |
| zgc:100951 | 0.414 | krt4 | -0.125 |
| lrwd1 | 0.409 | nova2 | -0.123 |
| stm | 0.408 | pvalb2 | -0.122 |
| cth1 | 0.405 | wu:fb55g09 | -0.122 |
| si:ch73-303b9.1 | 0.398 | elavl3 | -0.121 |
| mcm6l | 0.392 | hbbe1.1 | -0.121 |
| LOC101885477 | 0.388 | cyt1 | -0.119 |
| si:ch73-160h15.3 | 0.383 | ywhag2 | -0.119 |
| LOC100008030 | 0.380 | atp6ap2 | -0.118 |
| pabpc1l | 0.380 | elavl4 | -0.116 |
| ccne1 | 0.378 | snap25a | -0.116 |
| map1lc3c | 0.377 | atpv0e2 | -0.115 |
| eif4e1b | 0.369 | fam168a | -0.115 |
| h2af1al | 0.366 | stx1b | -0.115 |