Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| mespab | 0.320 | calm1a | -0.066 |
| cth1 | 0.301 | si:ch1073-429i10.3.1 | -0.065 |
| tbx16 | 0.298 | ccni | -0.063 |
| si:dkey-261j4.5 | 0.284 | gapdhs | -0.061 |
| tbxta | 0.267 | rnasekb | -0.061 |
| LOC100008030 | 0.265 | tuba1c | -0.061 |
| wnt11f2 | 0.264 | atp6v0cb | -0.059 |
| sebox | 0.262 | hbbe1.3 | -0.059 |
| ddx4 | 0.260 | gpm6aa | -0.057 |
| ndr1 | 0.236 | rtn1a | -0.057 |
| vrtn | 0.231 | hbae3 | -0.056 |
| lft1 | 0.230 | atp6v1e1b | -0.054 |
| ndr2 | 0.226 | atp6v1g1 | -0.054 |
| si:dkeyp-2e4.3 | 0.226 | krt4 | -0.054 |
| mespaa | 0.224 | cyt1 | -0.053 |
| snai1a | 0.219 | hbae1.1 | -0.053 |
| BX927327.1 | 0.216 | pvalb1 | -0.053 |
| pou5f3 | 0.213 | stmn1b | -0.053 |
| si:dkeyp-114g9.1 | 0.211 | gng3 | -0.052 |
| vent | 0.206 | sncb | -0.052 |
| zgc:56699 | 0.206 | pvalb2 | -0.051 |
| eve1 | 0.199 | mdkb | -0.050 |
| si:dkey-68o6.5 | 0.199 | nova2 | -0.050 |
| ved | 0.196 | vamp2 | -0.050 |
| s100a1 | 0.195 | hbbe1.1 | -0.049 |
| wu:fb97g03 | 0.194 | marcksl1a | -0.049 |
| h1m | 0.190 | elavl3 | -0.048 |
| im:7138239 | 0.187 | gpm6ab | -0.048 |
| foxa | 0.186 | ywhag2 | -0.048 |
| nnr | 0.186 | atp6ap2 | -0.047 |
| lrwd1 | 0.179 | atpv0e2 | -0.047 |
| sox32 | 0.179 | cyt1l | -0.047 |
| XLOC-015209 | 0.179 | gabarapl2 | -0.047 |
| helb | 0.176 | snap25a | -0.047 |
| si:dkey-261j4.3 | 0.174 | olfm1b | -0.046 |