Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| wnt11f2 | 0.254 | sox3 | -0.194 |
| tbxta | 0.238 | cxcr4b | -0.137 |
| osr1 | 0.230 | sox19a | -0.124 |
| lhx1a | 0.228 | id1 | -0.118 |
| pitx2 | 0.220 | cited4b | -0.110 |
| fgf8a | 0.217 | zic2b | -0.105 |
| BX927327.1 | 0.214 | inka1a | -0.103 |
| gata5 | 0.212 | asb11 | -0.100 |
| dkk1b | 0.211 | foxd5 | -0.094 |
| gata6 | 0.210 | aldob | -0.085 |
| ndr2 | 0.209 | gpd1b | -0.081 |
| sebox | 0.206 | si:ch1073-80i24.3 | -0.081 |
| msgn1 | 0.200 | nnr | -0.075 |
| mespab | 0.195 | glulb | -0.073 |
| cyp27c1 | 0.190 | shisa2a | -0.072 |
| sp5a | 0.186 | sox2 | -0.070 |
| wu:fb97g03 | 0.186 | pfkfb4b | -0.069 |
| dusp4 | 0.183 | cdca7a | -0.068 |
| FP102169.1 | 0.183 | si:ch211-170d8.2 | -0.067 |
| fscn1a | 0.181 | foxh1 | -0.061 |
| tpbga | 0.175 | cxcr4a | -0.061 |
| lft2 | 0.174 | pkdccb | -0.060 |
| notum1a | 0.174 | mych | -0.059 |
| foxa | 0.174 | snai2 | -0.058 |
| trib3 | 0.171 | kazald2 | -0.058 |
| fgf3 | 0.170 | thy1 | -0.058 |
| sox32 | 0.169 | LOC101885477 | -0.056 |
| efnb2b | 0.169 | nasp | -0.055 |
| hes6 | 0.167 | her3 | -0.055 |
| wnt5b | 0.164 | cited2 | -0.055 |
| efna1a | 0.158 | dnajb1b | -0.055 |
| ndr1 | 0.158 | zgc:64022 | -0.054 |
| efnb2a | 0.158 | gadd45ga | -0.054 |
| lft1 | 0.157 | prdm14 | -0.052 |
| tbx16 | 0.157 | maco1a | -0.052 |