Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| znf414 | 0.202 | sox3 | -0.093 |
| BX927394.2 | 0.196 | cxcr4b | -0.073 |
| wu:fc27b11 | 0.170 | sox19a | -0.066 |
| XLOC-025051 | 0.163 | foxd5 | -0.063 |
| glis1b | 0.159 | id1 | -0.062 |
| ptpreb | 0.155 | cited4b | -0.061 |
| LOC795083 | 0.150 | inka1a | -0.052 |
| msgn1 | 0.145 | sb:cb81 | -0.051 |
| lhx1a | 0.140 | blf | -0.049 |
| aplnrb | 0.134 | asb11 | -0.047 |
| CR854838.1 | 0.134 | si:ch1073-80i24.3 | -0.043 |
| XLOC-009783 | 0.133 | nsd2 | -0.041 |
| LOC101883236 | 0.131 | vamp3 | -0.041 |
| XLOC-009496 | 0.130 | zgc:173742 | -0.040 |
| pitx2 | 0.128 | mia3 | -0.037 |
| mespab | 0.128 | dis3l2 | -0.037 |
| rtn4rl2b | 0.127 | cdca7a | -0.037 |
| rgs16 | 0.124 | stk35l | -0.037 |
| gata5 | 0.123 | LOC101885477 | -0.037 |
| tlr20.3 | 0.123 | hcfc1a | -0.037 |
| CR376857.1 | 0.122 | foxh1 | -0.036 |
| tex33 | 0.121 | zcchc17 | -0.035 |
| BX927327.1 | 0.119 | hyou1 | -0.035 |
| si:ch211-66i15.4 | 0.119 | stmn1a | -0.035 |
| AL928707.3 | 0.117 | shisa2a | -0.035 |
| ada | 0.117 | syncripl | -0.035 |
| LOC101884985 | 0.117 | rpf1 | -0.035 |
| prex2 | 0.116 | zic2b | -0.035 |
| en2b | 0.116 | si:ch211-288g17.3 | -0.035 |
| BX323458.2 | 0.114 | gpd1b | -0.035 |
| zic2a | 0.113 | phrf1 | -0.035 |
| camkvb | 0.112 | ska2 | -0.034 |
| si:dkey-196j8.2 | 0.112 | gtf2e2 | -0.033 |
| klf3 | 0.112 | sec61a1l | -0.033 |
| XLOC-019069 | 0.110 | aldob | -0.033 |