Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msgn1 | 0.131 | fabp3 | -0.032 |
| tbx16l | 0.113 | tuba1c | -0.029 |
| myf5 | 0.101 | nova2 | -0.028 |
| her1 | 0.100 | elavl3 | -0.025 |
| her7 | 0.094 | gpm6aa | -0.024 |
| tbx6 | 0.091 | hbbe1.3 | -0.024 |
| tbx16 | 0.090 | krt4 | -0.024 |
| im:7138239 | 0.081 | cyt1 | -0.023 |
| cdx4 | 0.078 | mdkb | -0.023 |
| hspb1 | 0.078 | hbae1.1 | -0.022 |
| mespaa | 0.078 | hbae3 | -0.022 |
| apoc1 | 0.076 | icn | -0.022 |
| ripply2 | 0.076 | pvalb1 | -0.022 |
| mespab | 0.075 | ckbb | -0.021 |
| BX001014.2 | 0.072 | cyt1l | -0.021 |
| snai1a | 0.071 | epb41a | -0.021 |
| BX276101.1 | 0.070 | gapdhs | -0.021 |
| wu:fb97g03 | 0.070 | pvalb2 | -0.021 |
| cdx1a | 0.068 | XLOC-003689 | -0.021 |
| tcf15 | 0.067 | icn2 | -0.020 |
| BX927258.1 | 0.066 | krtt1c19e | -0.020 |
| BX005254.3 | 0.065 | prdx2 | -0.020 |
| BX511166.1 | 0.064 | rtn1a | -0.020 |
| meox1 | 0.063 | sox3 | -0.020 |
| sp5l | 0.063 | stmn1b | -0.020 |
| XLOC-039166 | 0.063 | tuba1a | -0.020 |
| insb | 0.062 | XLOC-003690 | -0.020 |
| vox | 0.062 | anxa1a | -0.019 |
| nid2a | 0.059 | ccni | -0.019 |
| efnb2b | 0.058 | msi1 | -0.019 |
| rbm38 | 0.058 | wu:fb55g09 | -0.019 |
| asph | 0.057 | XLOC-003692 | -0.019 |
| si:dkeyp-2e4.3 | 0.057 | abhd6a | -0.019 |
| tbxta | 0.057 | CU634008.1 | -0.019 |
| cx43.4 | 0.056 | her15.1 | -0.019 |