Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msgn1 | 0.165 | fabp3 | -0.102 |
| tbx16l | 0.147 | actc1b | -0.075 |
| apoc1 | 0.125 | sparc | -0.073 |
| tbx16 | 0.124 | eef1da | -0.068 |
| hes6 | 0.122 | rpl37 | -0.067 |
| her7 | 0.122 | bhmt | -0.066 |
| rem1 | 0.117 | col1a2 | -0.065 |
| efnb2b | 0.116 | cd81a | -0.065 |
| itm2cb | 0.115 | tpi1b | -0.065 |
| cx43.4 | 0.113 | gamt | -0.064 |
| gnaia | 0.111 | eif4a1b | -0.063 |
| apoeb | 0.111 | vwde | -0.063 |
| rbm38 | 0.108 | vdac3 | -0.062 |
| sod3a | 0.107 | col1a1a | -0.062 |
| her1 | 0.106 | acta1b | -0.062 |
| cdx4 | 0.104 | tpma | -0.061 |
| tob1a | 0.104 | col5a1 | -0.061 |
| nid2a | 0.103 | ak1 | -0.060 |
| notch1a | 0.099 | eno1a | -0.060 |
| myf5 | 0.098 | pvalb1 | -0.060 |
| BX005254.3 | 0.098 | ckmb | -0.060 |
| BX927258.1 | 0.098 | pabpc4 | -0.059 |
| hspb1 | 0.097 | pvalb2 | -0.059 |
| BX511111.1 | 0.096 | ckma | -0.059 |
| snai1a | 0.095 | mylpfa | -0.058 |
| si:ch73-281n10.2 | 0.095 | zgc:114188 | -0.058 |
| XLOC-007906 | 0.094 | si:dkey-16p21.8 | -0.058 |
| ddit4 | 0.094 | ttn.2 | -0.058 |
| aplnra | 0.094 | atp5if1b | -0.057 |
| vox | 0.092 | aldoab | -0.057 |
| LOC110439453 | 0.092 | postnb | -0.056 |
| XLOC-042934 | 0.092 | mylz3 | -0.056 |
| asph | 0.091 | eef1b2 | -0.056 |
| tbx6 | 0.090 | ldb3a | -0.056 |
| dlc | 0.090 | tnnc2 | -0.056 |