Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her1 | 0.122 | fabp3 | -0.025 |
| msgn1 | 0.106 | tuba1c | -0.024 |
| tbx16l | 0.097 | gapdhs | -0.020 |
| myf5 | 0.093 | gpm6aa | -0.020 |
| her7 | 0.086 | nova2 | -0.020 |
| ripply2 | 0.086 | elavl3 | -0.019 |
| LOC110439323 | 0.083 | hbbe1.3 | -0.019 |
| tbx6 | 0.083 | mdkb | -0.019 |
| XLOC-039166 | 0.083 | pvalb1 | -0.019 |
| BX511166.1 | 0.075 | pvalb2 | -0.019 |
| tcf15 | 0.073 | celf2 | -0.018 |
| dgkb | 0.073 | ckbb | -0.018 |
| BX005254.3 | 0.072 | hbae3 | -0.018 |
| znfl1k | 0.072 | prdx2 | -0.018 |
| LOC110438146 | 0.070 | rtn1a | -0.018 |
| apoc1 | 0.068 | stmn1b | -0.018 |
| BX001014.2 | 0.068 | tmsb | -0.018 |
| ece1 | 0.068 | wu:fb55g09 | -0.018 |
| mespab | 0.066 | marcksl1a | -0.018 |
| tbx16 | 0.066 | calm1a | -0.018 |
| mespaa | 0.065 | foxp4 | -0.017 |
| meox1 | 0.063 | tuba1a | -0.017 |
| snai1a | 0.060 | fabp7a | -0.016 |
| hoxb10a | 0.060 | hbae1.1 | -0.016 |
| fgf17 | 0.059 | krt4 | -0.016 |
| XLOC-018346 | 0.059 | ccni | -0.015 |
| XLOC-042234 | 0.059 | cotl1 | -0.015 |
| hoxd10a | 0.058 | CU467822.1 | -0.015 |
| pcdh8 | 0.058 | cyt1 | -0.015 |
| cdx4 | 0.057 | eif4a1b | -0.015 |
| fn1b | 0.057 | gpm6ab | -0.015 |
| hspb1 | 0.056 | krtt1c19e | -0.015 |
| hsp90aa1.1 | 0.055 | rnasekb | -0.015 |
| unc45b | 0.055 | tubb5 | -0.015 |
| BX927258.1 | 0.054 | cap1 | -0.014 |