| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb3a | 0.416 | hmgb2a | -0.109 |
| hoxc4a | 0.294 | pcna | -0.104 |
| mab21l2 | 0.291 | nop58 | -0.104 |
| meis2b | 0.243 | anp32b | -0.102 |
| hoxd4a | 0.242 | ctnnb1 | -0.099 |
| meis1b | 0.226 | npm1a | -0.099 |
| pik3r3b | 0.225 | ranbp1 | -0.099 |
| hoxa3a | 0.223 | snu13b | -0.099 |
| crabp1b | 0.218 | dkc1 | -0.097 |
| tshz2 | 0.199 | id1 | -0.097 |
| hoxb5b | 0.195 | si:ch73-281n10.2 | -0.097 |
| znf503 | 0.188 | nop10 | -0.096 |
| raraa | 0.185 | fbl | -0.096 |
| tshz3b | 0.183 | aldob | -0.096 |
| hoxb5a | 0.173 | rsl1d1 | -0.091 |
| rarga | 0.168 | nop56 | -0.091 |
| si:ch73-386h18.1 | 0.166 | banf1 | -0.091 |
| elavl3 | 0.165 | nhp2 | -0.091 |
| meis3 | 0.160 | sox19a | -0.090 |
| CR751227.2 | 0.158 | ccnd1 | -0.089 |
| hoxc1a | 0.156 | en2b | -0.089 |
| scrt1a | 0.155 | rpa3 | -0.089 |
| BX322661.2 | 0.152 | lig1 | -0.089 |
| tshz1 | 0.149 | mcm6 | -0.088 |
| znf703 | 0.145 | tuba8l4 | -0.086 |
| tmeff1b | 0.144 | nop2 | -0.084 |
| sox7 | 0.144 | hspb1 | -0.084 |
| hoxc3a | 0.138 | selenoh | -0.084 |
| plxna4 | 0.134 | mcm3 | -0.084 |
| zfhx3 | 0.134 | cdca7a | -0.083 |
| meis2a | 0.132 | chaf1a | -0.082 |
| hunk | 0.132 | nutf2l | -0.082 |
| gdf11 | 0.132 | cdca7b | -0.082 |
| nsg2 | 0.131 | fen1 | -0.081 |
| hoxc5a | 0.131 | snrpb | -0.080 |