| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb3a | 0.165 | ahcy | -0.056 |
| meis1b | 0.161 | foxg1b | -0.051 |
| meis2b | 0.161 | rorb | -0.048 |
| rarga | 0.131 | six3b | -0.047 |
| hoxb2a | 0.127 | six6b | -0.047 |
| znf503 | 0.124 | crx | -0.046 |
| hoxa2b | 0.121 | syt5b | -0.045 |
| meis3 | 0.113 | chchd10 | -0.044 |
| meis2a | 0.113 | fabp7a | -0.044 |
| mfap2 | 0.112 | otx2b | -0.044 |
| mab21l2 | 0.110 | gapdh | -0.043 |
| tpm4a | 0.104 | otx5 | -0.043 |
| hoxd3a | 0.098 | en2b | -0.042 |
| meis1a | 0.096 | shisa2a | -0.041 |
| pmp22a | 0.094 | cox17 | -0.040 |
| raraa | 0.092 | otx2a | -0.040 |
| si:dkey-261h17.1 | 0.090 | hes2.2 | -0.039 |
| cd81a | 0.089 | vsx1 | -0.039 |
| fstl1b | 0.089 | foxn4 | -0.038 |
| fbn2b | 0.088 | ndrg1b | -0.038 |
| si:ch211-286o17.1 | 0.088 | mgst1.2 | -0.037 |
| ier5l | 0.087 | rs1a | -0.037 |
| si:ch73-386h18.1 | 0.087 | rx2 | -0.037 |
| nr2f1a | 0.086 | aldob | -0.036 |
| pbx4 | 0.085 | blvrb | -0.036 |
| hoxd4a | 0.084 | fezf2 | -0.036 |
| tmeff1b | 0.084 | hbbe2 | -0.036 |
| hoxc4a | 0.083 | nr2e1 | -0.036 |
| wls | 0.083 | si:ch1073-80i24.3 | -0.036 |
| CABZ01075068.1 | 0.082 | apoa1b | -0.035 |
| lin28a | 0.081 | hemgn | -0.035 |
| hoxa3a | 0.079 | ppdpfa | -0.035 |
| ier5 | 0.077 | rx1 | -0.035 |
| pik3r3b | 0.077 | si:dkey-16p21.8 | -0.035 |
| col5a1 | 0.077 | sod2 | -0.035 |