| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fgf20a | 0.511 | krt8 | -0.150 |
| fgf4 | 0.464 | krt18a.1 | -0.135 |
| gdf11 | 0.444 | col2a1a | -0.127 |
| hoxd10a | 0.421 | si:ch73-23l24.1 | -0.125 |
| si:ch211-129o18.4 | 0.415 | zgc:113232 | -0.122 |
| hoxb10a | 0.409 | cmn | -0.122 |
| BX005254.3 | 0.406 | zmp:0000000760 | -0.120 |
| alpi.1 | 0.390 | col9a1b | -0.119 |
| hoxc3a | 0.370 | col9a2 | -0.114 |
| her12 | 0.370 | cnmd | -0.113 |
| hoxd9a | 0.363 | col11a1a | -0.112 |
| sst6 | 0.359 | marcksl1b | -0.111 |
| cdx4 | 0.354 | col11a2 | -0.109 |
| sall4 | 0.352 | epyc | -0.108 |
| her4.1 | 0.341 | FQ323156.1 | -0.107 |
| myclb | 0.341 | ucmab | -0.106 |
| fgf3 | 0.341 | col9a3 | -0.101 |
| parvb | 0.327 | agtrap | -0.100 |
| fgf8a | 0.325 | snorc | -0.099 |
| tmem134 | 0.320 | ehd2b | -0.097 |
| her15.1 | 0.318 | ppdpfa | -0.094 |
| hoxd12a | 0.317 | matn3a | -0.093 |
| wnt5b | 0.315 | fxyd6l | -0.093 |
| si:ch211-27e6.1 | 0.315 | tgfb3 | -0.092 |
| fam49al | 0.315 | si:ch211-243g18.2 | -0.090 |
| hoxa9a | 0.311 | pleca | -0.090 |
| pcp4a | 0.308 | wfdc2 | -0.089 |
| BX001014.2 | 0.307 | cpn1 | -0.089 |
| nradd | 0.305 | tppp3 | -0.088 |
| hoxb7a | 0.303 | matn3b | -0.088 |
| fn1a | 0.301 | si:dkey-6n6.1 | -0.087 |
| emid1 | 0.298 | zgc:162730 | -0.087 |
| hoxd11a | 0.292 | cyr61 | -0.087 |
| hes6 | 0.290 | pitx2 | -0.087 |
| lrrc17 | 0.283 | gas2b | -0.087 |