| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax3a | 0.126 | rorb | -0.036 |
| wls | 0.113 | ptmab | -0.033 |
| zgc:165461 | 0.098 | foxg1b | -0.031 |
| tpbga | 0.096 | gpm6aa | -0.030 |
| wnt4a | 0.093 | btg1 | -0.030 |
| rfx4 | 0.092 | six3b | -0.027 |
| noto | 0.090 | ptmaa | -0.027 |
| gas1a | 0.089 | cadm3 | -0.027 |
| pax7b | 0.088 | gpm6ab | -0.026 |
| si:ch211-69b22.5 | 0.088 | pax6b | -0.024 |
| gdf10a | 0.088 | hmgb1a | -0.022 |
| qki2 | 0.087 | ndrg4 | -0.022 |
| sparc | 0.086 | neurod4 | -0.022 |
| zic1 | 0.086 | fkbp1ab | -0.021 |
| ackr3b | 0.085 | pvalb2 | -0.021 |
| rspo2 | 0.084 | wu:fi46h04 | -0.021 |
| ccbe1 | 0.084 | hmx4 | -0.021 |
| fstl1b | 0.083 | scrt2 | -0.021 |
| boc | 0.082 | cirbpb | -0.021 |
| LOC108191636 | 0.081 | si:ch73-1a9.3 | -0.021 |
| tpm4a | 0.080 | actc1b | -0.021 |
| si:ch211-66e2.5 | 0.080 | ppiab | -0.021 |
| LOC110440044 | 0.078 | ubc | -0.020 |
| zic6 | 0.076 | vsx1 | -0.020 |
| axin2 | 0.076 | pax6a | -0.020 |
| zic3 | 0.075 | pvalb1 | -0.020 |
| cd63 | 0.073 | pcbp3 | -0.020 |
| fkbp14 | 0.073 | anp32e | -0.020 |
| si:ch211-265g22.4 | 0.073 | hmgn2 | -0.019 |
| tmem47 | 0.072 | si:ch1073-429i10.3.1 | -0.019 |
| lbx1b | 0.072 | si:ch211-129p13.1 | -0.019 |
| cdon | 0.072 | h2afva | -0.019 |
| tnfrsf19 | 0.072 | isl1 | -0.019 |
| fgfr2 | 0.072 | vsx2 | -0.019 |
| pax7a | 0.071 | marcksl1b | -0.019 |