| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msgn1 | 0.185 | prdx2 | -0.063 |
| her7 | 0.170 | hemgn | -0.060 |
| tbx16 | 0.157 | hbae1.1 | -0.058 |
| vox | 0.154 | tspo | -0.057 |
| hes6 | 0.140 | cahz | -0.055 |
| cx43.4 | 0.137 | hbbe1.3 | -0.055 |
| cdx4 | 0.136 | blvrb | -0.054 |
| her1 | 0.128 | hbae3 | -0.054 |
| pax3a | 0.125 | gpx1a | -0.052 |
| cnnm4b | 0.125 | hbbe1.1 | -0.052 |
| mdka | 0.125 | nt5c2l1 | -0.051 |
| cdx1a | 0.124 | zgc:163057 | -0.051 |
| zic2a | 0.122 | hbbe2 | -0.051 |
| inha | 0.121 | hbae1.3 | -0.050 |
| RF00325 | 0.121 | alas2 | -0.050 |
| id1 | 0.117 | hbbe1.2 | -0.050 |
| LOC103910741 | 0.113 | tmem14ca | -0.047 |
| XLOC-000324 | 0.113 | slc4a1a | -0.046 |
| vent | 0.112 | nmt1b | -0.046 |
| vsig10l | 0.109 | epb41b | -0.044 |
| hoxa11b | 0.109 | creg1 | -0.043 |
| XLOC-003690 | 0.107 | selenoj | -0.039 |
| LOC103911911 | 0.107 | plac8l1 | -0.039 |
| mdkb | 0.106 | hdr | -0.039 |
| BX005254.3 | 0.106 | tmod4 | -0.039 |
| marcksb | 0.105 | si:ch211-227m13.1 | -0.038 |
| ilf3b | 0.105 | rfesd | -0.038 |
| zic2b | 0.104 | hbae5 | -0.037 |
| si:dkey-56m19.5 | 0.104 | hbbe3 | -0.037 |
| gucy2g | 0.104 | urod | -0.037 |
| msx3 | 0.104 | sptb | -0.037 |
| CR589875.1 | 0.104 | ucp3 | -0.037 |
| hmgb1b | 0.103 | fam210b | -0.037 |
| ctnnb1 | 0.102 | tfr1a | -0.036 |
| cdh2 | 0.102 | si:ch211-207c6.2 | -0.036 |