| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msx1b | 0.327 | atp5if1b | -0.064 |
| olig3 | 0.211 | gng3 | -0.062 |
| cdon | 0.197 | gpm6aa | -0.062 |
| atoh1a | 0.182 | gapdhs | -0.060 |
| id1 | 0.170 | gpm6ab | -0.060 |
| gdf10a | 0.160 | sncb | -0.059 |
| bambia | 0.159 | stmn1b | -0.059 |
| gas1a | 0.159 | vamp2 | -0.058 |
| fzd10 | 0.158 | ckbb | -0.056 |
| pax3a | 0.158 | atp6v0cb | -0.055 |
| boc | 0.155 | ywhah | -0.054 |
| atoh8 | 0.153 | rnasekb | -0.052 |
| mdka | 0.151 | si:ch211-195b11.3 | -0.052 |
| wls | 0.147 | rtn1a | -0.051 |
| wnt10b | 0.147 | elavl4 | -0.050 |
| zic5 | 0.147 | mllt11 | -0.050 |
| axin2 | 0.145 | pycard | -0.050 |
| zic1 | 0.137 | stx1b | -0.050 |
| msx1a | 0.136 | stxbp1a | -0.050 |
| zic2a | 0.136 | atp6v1e1b | -0.049 |
| msx2b | 0.135 | csdc2a | -0.049 |
| tpbga | 0.134 | icn | -0.049 |
| slc1a3a | 0.132 | icn2 | -0.049 |
| zic2b | 0.132 | krtt1c19e | -0.049 |
| akap12b | 0.131 | cnrip1a | -0.048 |
| alx4a | 0.123 | gng2 | -0.048 |
| bmp5 | 0.122 | krt17 | -0.048 |
| rfx4 | 0.122 | krt4 | -0.048 |
| gas1b | 0.119 | krt5 | -0.048 |
| fmoda | 0.116 | selenow2b | -0.048 |
| nkd1 | 0.116 | stmn2a | -0.048 |
| zgc:114181 | 0.116 | wu:fb18f06 | -0.048 |
| prrx1b | 0.115 | zgc:193505 | -0.048 |
| cldn5a | 0.114 | zgc:65894 | -0.048 |
| lmx1a | 0.114 | agr1 | -0.047 |