| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r | 
| zic2a | 0.506 | epcam | -0.078 | 
| zic1 | 0.391 | cfl1l | -0.073 | 
| zic4 | 0.332 | cd9b | -0.068 | 
| zic3 | 0.228 | pfn1 | -0.067 | 
| zic6 | 0.226 | s100a10b | -0.067 | 
| BX469902.1 | 0.203 | si:dkey-16p21.8 | -0.067 | 
| fzd10 | 0.185 | tuba8l2 | -0.066 | 
| si:ch211-69b22.5 | 0.178 | tmsb1 | -0.065 | 
| mdkb | 0.176 | anxa1a | -0.062 | 
| clybl | 0.175 | krt4 | -0.062 | 
| msx1b | 0.171 | wu:fb18f06 | -0.062 | 
| olig3 | 0.171 | f11r.1 | -0.061 | 
| pax3a | 0.157 | pycard | -0.060 | 
| cldn5a | 0.155 | capns1a | -0.059 | 
| mdka | 0.153 | icn | -0.059 | 
| gdf10a | 0.150 | arhgef5 | -0.058 | 
| nebl | 0.150 | cdh1 | -0.058 | 
| msx3 | 0.147 | cldnb | -0.058 | 
| zic2b | 0.138 | cyt1 | -0.058 | 
| neurod2 | 0.133 | ahnak | -0.057 | 
| XLOC-003690 | 0.133 | anxa2a | -0.057 | 
| axin2 | 0.132 | krt5 | -0.057 | 
| her2 | 0.131 | lgals3b | -0.057 | 
| rfx4 | 0.126 | prr13 | -0.057 | 
| wnt10b | 0.126 | spint2 | -0.057 | 
| fabp11a | 0.124 | zgc:153284 | -0.056 | 
| tpbga | 0.121 | zgc:162730 | -0.056 | 
| boc | 0.117 | cldn7b | -0.055 | 
| cdon | 0.117 | s100v1 | -0.055 | 
| draxin | 0.117 | spint1a | -0.055 | 
| gas1a | 0.116 | krt8 | -0.054 | 
| lmx1a | 0.114 | tmem238a | -0.054 | 
| her15.1 | 0.113 | zgc:175088 | -0.054 | 
| pdgfaa | 0.109 | capgb | -0.052 | 
| wls | 0.106 | cyt1l | -0.052 |