| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| zic2a | 0.595 | eya1 | -0.073 |
| CR394555.1 | 0.381 | six1b | -0.068 |
| atoh1c | 0.373 | si:dkey-222f2.1 | -0.065 |
| zic1 | 0.361 | si:ch211-152c2.3 | -0.060 |
| zic4 | 0.349 | cd9b | -0.057 |
| tlx3b | 0.315 | NC-002333.17 | -0.057 |
| BX469902.1 | 0.311 | rps27.1 | -0.054 |
| kcnn1b | 0.295 | epcam | -0.053 |
| LOC110438754 | 0.276 | fthl27 | -0.052 |
| draxin | 0.272 | znf385a | -0.049 |
| olig3 | 0.266 | spint2 | -0.045 |
| LO018380.1 | 0.261 | si:ch211-243g18.2 | -0.045 |
| gabra6a | 0.254 | zgc:153867 | -0.044 |
| zmp:0000000951 | 0.248 | si:ch211-286b5.5 | -0.043 |
| en2a | 0.245 | rps14 | -0.042 |
| cremb | 0.244 | hvcn1 | -0.042 |
| znf750 | 0.241 | sparc | -0.042 |
| tmem150c | 0.234 | mt-co1 | -0.042 |
| synpr | 0.228 | jupa | -0.041 |
| grpr | 0.227 | ptbp1b | -0.041 |
| BX005305.1 | 0.224 | myl12.1 | -0.041 |
| zic2b | 0.223 | btc | -0.041 |
| nebl | 0.222 | lsr | -0.041 |
| tmem86b | 0.219 | fosab | -0.041 |
| arhgap20 | 0.217 | tomm20b | -0.041 |
| tfec | 0.216 | cldn7b | -0.041 |
| nox5 | 0.215 | sec61b | -0.040 |
| wnt1 | 0.214 | bzw1b | -0.040 |
| blnk | 0.213 | f11r.1 | -0.040 |
| rspo1 | 0.208 | glrx | -0.040 |
| XLOC-011066 | 0.207 | sdc4 | -0.040 |
| CU655961.4 | 0.207 | glod5 | -0.040 |
| zic3 | 0.207 | tuba8l3 | -0.040 |
| gabrd | 0.206 | cldnb | -0.040 |
| wnt10b | 0.200 | six1a | -0.039 |