| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| otx5 | 0.261 | id1 | -0.134 |
| crx | 0.249 | aldob | -0.130 |
| si:dkey-21o19.2 | 0.249 | fosab | -0.128 |
| ckbb | 0.248 | eef1da | -0.115 |
| ndrg1b | 0.235 | bzw1b | -0.111 |
| gpm6ab | 0.218 | eif4ebp3l | -0.111 |
| prdm1b | 0.214 | hdlbpa | -0.106 |
| XLOC-014477 | 0.213 | vamp3 | -0.102 |
| cadm3 | 0.212 | epcam | -0.101 |
| scrt2 | 0.209 | slc38a5b | -0.101 |
| chd4a | 0.197 | aldh9a1a.1 | -0.100 |
| smad7 | 0.197 | ccng1 | -0.100 |
| nr2e3 | 0.194 | sparc | -0.100 |
| myt1b | 0.191 | sdc4 | -0.099 |
| epb41a | 0.189 | tuba8l2 | -0.098 |
| pde6gb | 0.186 | gsta.1 | -0.097 |
| stmn1b | 0.186 | zgc:162730 | -0.097 |
| tuba1c | 0.186 | cfl1l | -0.096 |
| foxg1b | 0.183 | npm1a | -0.095 |
| gpm6aa | 0.181 | zfp36l1a | -0.095 |
| si:ch73-28h20.1 | 0.181 | junba | -0.093 |
| rorb | 0.181 | si:dkey-16p21.8 | -0.093 |
| tuba1a | 0.178 | atp1b1a | -0.092 |
| hnrnpa0a | 0.177 | COX7A2 (1 of many) | -0.092 |
| baz2ba | 0.176 | cd9b | -0.090 |
| jpt1b | 0.176 | ckap4 | -0.090 |
| zswim5 | 0.176 | ier2a | -0.090 |
| h2afva | 0.173 | ier2b | -0.090 |
| btg1 | 0.172 | jun | -0.090 |
| hmgb1b | 0.172 | cebpd | -0.089 |
| pdcl | 0.172 | pleca | -0.089 |
| celf3a | 0.170 | XLOC-044191 | -0.089 |
| gngt2a | 0.168 | capns1a | -0.087 |
| scrt1a | 0.168 | rps27l | -0.087 |
| smarce1 | 0.167 | selenoh | -0.087 |