| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc3a | 0.224 | CU467822.1 | -0.160 |
| meis1b | 0.204 | fabp7a | -0.145 |
| hoxb1b | 0.192 | gpm6bb | -0.124 |
| hoxb9a | 0.182 | nfia | -0.123 |
| hoxd3a | 0.166 | CU634008.1 | -0.123 |
| hoxb3a | 0.165 | CR848047.1 | -0.123 |
| meis2a | 0.162 | zwi | -0.116 |
| hoxa3a | 0.162 | cd82a | -0.109 |
| hoxc8a | 0.158 | syngr2b | -0.106 |
| pou2f2a | 0.158 | itm2ba | -0.105 |
| hoxa9a | 0.155 | qki2 | -0.102 |
| isl2b | 0.152 | celf2 | -0.101 |
| hoxb8a | 0.149 | actb2 | -0.099 |
| hoxd9a | 0.139 | si:ch73-30b17.2 | -0.097 |
| tshz1 | 0.139 | zgc:112994 | -0.096 |
| pik3r3b | 0.137 | cldnk | -0.096 |
| dhrs3b | 0.136 | podxl | -0.096 |
| CABZ01075068.1 | 0.135 | mbpa | -0.095 |
| LOC100537384 | 0.133 | CR751602.2 | -0.095 |
| hoxc9a | 0.132 | atp1a1b | -0.095 |
| hoxb7a | 0.130 | ppap2d | -0.095 |
| meis2b | 0.129 | efnb1 | -0.094 |
| hoxa9b | 0.127 | ppp1r14aa | -0.093 |
| h3f3d | 0.127 | slc1a2b | -0.093 |
| elavl4 | 0.125 | slc1a3b | -0.090 |
| wnt4a | 0.124 | cdhr5a | -0.089 |
| wnt11r | 0.123 | mag | -0.089 |
| islr2 | 0.123 | si:dkey-164f24.2 | -0.089 |
| lhx1a | 0.122 | sox9a | -0.088 |
| mtus2a | 0.121 | timd4 | -0.088 |
| hoxc1a | 0.120 | efhd1 | -0.087 |
| snap25a | 0.119 | si:dkey-204f11.64 | -0.086 |
| cplx2 | 0.119 | ugt8 | -0.086 |
| meis1a | 0.119 | fabp2 | -0.086 |
| syt2a | 0.117 | notch3 | -0.085 |