| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.363 | stm | -0.138 |
| hoxd12a | 0.347 | akap12b | -0.137 |
| hoxd10a | 0.327 | NC-002333.4 | -0.135 |
| lrrc17 | 0.296 | anp32e | -0.126 |
| fgf20a | 0.290 | acin1b | -0.121 |
| gdf11 | 0.288 | s100a1 | -0.120 |
| hoxd13a | 0.276 | hnrnpa1a | -0.117 |
| alpi.1 | 0.276 | ube2na | -0.116 |
| dand5 | 0.273 | tbx16 | -0.115 |
| hoxc13a | 0.271 | metap2b | -0.115 |
| her12 | 0.264 | tardbp | -0.114 |
| her15.1 | 0.260 | hnrnpub | -0.114 |
| hoxa10b | 0.258 | si:ch211-152c2.3 | -0.113 |
| BX005254.3 | 0.252 | hnrnpa1b | -0.111 |
| cdaa | 0.252 | snrnp70 | -0.110 |
| pcp4a | 0.251 | AL935174.5 | -0.110 |
| hoxc11a | 0.250 | srrm1 | -0.110 |
| hoxa9a | 0.248 | chrd | -0.110 |
| hoxa13b | 0.247 | wu:fb97g03 | -0.108 |
| hoxd11a | 0.243 | ilf3b | -0.107 |
| hoxb13a | 0.241 | fscn1a | -0.106 |
| hoxc13b | 0.241 | si:dkey-66i24.9 | -0.106 |
| myclb | 0.234 | hnrnpm | -0.106 |
| hoxa11a | 0.233 | pitx2 | -0.106 |
| hoxa11b | 0.233 | shisa2a | -0.105 |
| her1 | 0.230 | rbm4.3 | -0.105 |
| si:ch211-129o18.4 | 0.229 | si:ch73-160h15.3 | -0.105 |
| fgf4 | 0.225 | fbl | -0.104 |
| sall4 | 0.225 | insb | -0.103 |
| hoxd9a | 0.225 | cd2bp2 | -0.103 |
| aplnr2 | 0.221 | ddx18 | -0.103 |
| hnrnpa0l | 0.219 | si:dkey-92i17.2 | -0.103 |
| hoxa13a | 0.216 | zgc:110425 | -0.103 |
| rab36 | 0.214 | zmp:0000000624 | -0.102 |
| XLOC-042222 | 0.213 | sfpq | -0.102 |