| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| itm2cb | 0.346 | ckma | -0.208 |
| BX001014.2 | 0.320 | bhmt | -0.204 |
| hoxb7a | 0.319 | si:dkey-16p21.8 | -0.203 |
| hes6 | 0.312 | actc1b | -0.201 |
| her12 | 0.301 | gapdh | -0.200 |
| BX005254.3 | 0.301 | ckmb | -0.200 |
| nid2a | 0.298 | ak1 | -0.199 |
| her1 | 0.296 | fabp3 | -0.192 |
| hoxb10a | 0.294 | tpi1b | -0.192 |
| hoxc3a | 0.284 | atp2a1 | -0.187 |
| her7 | 0.281 | pvalb1 | -0.186 |
| apoc1 | 0.274 | pvalb2 | -0.185 |
| hoxd10a | 0.272 | neb | -0.185 |
| msgn1 | 0.270 | tnnc2 | -0.184 |
| fn1b | 0.267 | mylpfa | -0.183 |
| cx43.4 | 0.260 | eno3 | -0.182 |
| pcdh8 | 0.258 | FQ323156.1 | -0.180 |
| greb1 | 0.251 | ldb3b | -0.179 |
| rarga | 0.237 | mylz3 | -0.179 |
| fzd10 | 0.235 | si:ch73-367p23.2 | -0.178 |
| cdx4 | 0.235 | tnnt3a | -0.174 |
| apoeb | 0.235 | actn3a | -0.174 |
| hoxa10b | 0.233 | aldoab | -0.173 |
| nop58 | 0.229 | ank1a | -0.172 |
| snrpf | 0.226 | myom1a | -0.172 |
| npm1a | 0.226 | casq2 | -0.171 |
| h2afvb | 0.226 | smyd1a | -0.170 |
| snai1a | 0.226 | acta1b | -0.170 |
| hoxa9a | 0.225 | si:ch211-266g18.10 | -0.169 |
| si:ch73-281n10.2 | 0.225 | pgam2 | -0.168 |
| tbx16l | 0.224 | pmp22b | -0.168 |
| ptges3b | 0.223 | CABZ01078594.1 | -0.168 |
| hoxd12a | 0.223 | tmod4 | -0.168 |
| snu13b | 0.222 | glud1b | -0.168 |
| raraa | 0.222 | nme2b.2 | -0.167 |