| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb6b | 0.214 | rarga | -0.061 |
| hoxb8a | 0.212 | fibina | -0.054 |
| hoxb1b | 0.157 | col2a1b | -0.053 |
| BX001014.2 | 0.146 | col9a2 | -0.048 |
| hoxb9a | 0.145 | col9a1a | -0.048 |
| hoxc1a | 0.142 | six1a | -0.047 |
| BX469925.3 | 0.141 | col2a1a | -0.047 |
| tmem88b | 0.140 | foxc1b | -0.044 |
| hoxc3a | 0.131 | col9a3 | -0.043 |
| hoxc8a | 0.127 | krt8 | -0.043 |
| cfd | 0.122 | sparc | -0.041 |
| fbn2a.1 | 0.120 | cnmd | -0.041 |
| col7a1l | 0.113 | fgfbp2b | -0.040 |
| emilin2b | 0.111 | krt18a.1 | -0.040 |
| hoxb7a | 0.109 | ecrg4a | -0.039 |
| meis3 | 0.104 | CU929237.1 | -0.038 |
| hoxc6a | 0.104 | dlx5a | -0.038 |
| jam2b | 0.104 | tgfb3 | -0.035 |
| ftr82 | 0.099 | pvalb1 | -0.035 |
| hoxb6a | 0.097 | sox9a | -0.035 |
| XLOC-005272 | 0.096 | fxyd1 | -0.034 |
| si:dkey-12j5.1 | 0.095 | six2a | -0.034 |
| LOC101887118 | 0.094 | LO018188.1 | -0.034 |
| klhl10b.1 | 0.093 | col11a2 | -0.034 |
| isl2b | 0.093 | col11a1a | -0.034 |
| pth2r | 0.092 | bhmt | -0.033 |
| wu:fb97g03 | 0.092 | eef1da | -0.033 |
| pitx1 | 0.090 | cyp26b1 | -0.033 |
| hoxb3a | 0.089 | tgfb2 | -0.032 |
| gata5 | 0.089 | COX3 | -0.032 |
| hoxa9a | 0.089 | dlx3b | -0.031 |
| tuba8l2 | 0.088 | VIT | -0.031 |
| hoxb5b | 0.088 | dlx2a | -0.031 |
| cdx4 | 0.087 | cthrc1a | -0.031 |
| dhrs3b | 0.087 | cdh11 | -0.031 |