| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb9a | 0.575 | si:ch211-243g18.2 | -0.175 |
| hoxb7a | 0.500 | stm | -0.168 |
| hoxc3a | 0.479 | agr2 | -0.161 |
| hoxb6a | 0.465 | col2a1a | -0.144 |
| cxcr4b | 0.401 | otomp | -0.139 |
| hoxc8a | 0.395 | atp1b1a | -0.135 |
| hoxb3a | 0.347 | col9a2 | -0.134 |
| hs3st3b1a | 0.344 | tbx2b | -0.125 |
| met | 0.324 | acbd7 | -0.123 |
| hoxb5a | 0.299 | cldna | -0.121 |
| clcf1 | 0.293 | bricd5 | -0.121 |
| runx3 | 0.291 | sox10 | -0.121 |
| pkdccb | 0.288 | col9a3 | -0.118 |
| hoxc6a | 0.284 | si:dkey-98f17.3 | -0.117 |
| itga6b | 0.282 | col9a1a | -0.115 |
| her12 | 0.281 | col11a1a | -0.113 |
| sash1a | 0.276 | hmga2 | -0.112 |
| sdk1b | 0.253 | efhd1 | -0.112 |
| kremen1 | 0.250 | sparc | -0.111 |
| anos1a | 0.247 | FP017215.1 | -0.111 |
| anxa4 | 0.243 | AL954322.2 | -0.110 |
| zgc:162939 | 0.243 | tbx2a | -0.110 |
| plpp2b | 0.233 | mdka | -0.109 |
| efnb3b | 0.231 | si:dkey-16l2.17 | -0.109 |
| hoxc9a | 0.230 | mb | -0.104 |
| hoxc1a | 0.229 | atp1a1a.4 | -0.103 |
| tfap2c | 0.227 | slc4a4b | -0.103 |
| lmo4b | 0.223 | col9a1b | -0.102 |
| rgma | 0.221 | pax2a | -0.101 |
| tfap2a | 0.219 | matn4 | -0.099 |
| hmx3a | 0.219 | ephb3 | -0.099 |
| krt18b | 0.218 | id3 | -0.098 |
| fndc1 | 0.216 | col2a1b | -0.097 |
| wnt10a | 0.216 | sox6 | -0.096 |
| capn8 | 0.212 | OTOP1 | -0.096 |