| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.739 | gapdhs | -0.248 |
| hoxb10a | 0.686 | krt91 | -0.235 |
| hoxb7a | 0.623 | capns1a | -0.233 |
| hoxb9a | 0.610 | anxa1a | -0.233 |
| hoxc8a | 0.603 | aqp3a | -0.233 |
| hoxd9a | 0.578 | eef1da | -0.222 |
| insl5a | 0.561 | col1a1b | -0.220 |
| apoc1 | 0.535 | cotl1 | -0.218 |
| emx2 | 0.531 | rplp2 | -0.217 |
| LOC101882251 | 0.518 | krtt1c19e | -0.214 |
| hoxd10a | 0.517 | col1a2 | -0.211 |
| sp8b | 0.517 | col1a1a | -0.205 |
| hoxc6b | 0.509 | anxa2a | -0.201 |
| hoxa10b | 0.506 | rbp4 | -0.199 |
| hoxc3a | 0.496 | sparc | -0.198 |
| hoxd11a | 0.490 | capgb | -0.191 |
| hoxd12a | 0.480 | si:dkey-33c14.3 | -0.190 |
| crabp2a | 0.479 | postnb | -0.190 |
| mllt3 | 0.467 | s100a10b | -0.189 |
| hoxa9b | 0.465 | col14a1b | -0.176 |
| vcana | 0.463 | cxl34b.11 | -0.176 |
| prickle1a | 0.446 | pycard | -0.174 |
| nradd | 0.444 | s100v1 | -0.172 |
| hoxa9a | 0.443 | rps29 | -0.171 |
| sp8a | 0.423 | ahcy | -0.170 |
| tmeff1b | 0.420 | si:ch211-39i22.1 | -0.170 |
| hoxd3a | 0.412 | epgn | -0.168 |
| BX927258.1 | 0.410 | ak1 | -0.168 |
| asb11 | 0.409 | pvalb1 | -0.165 |
| ccdc3a | 0.406 | ptmaa | -0.162 |
| b3gnt7 | 0.404 | pvalb2 | -0.160 |
| hoxa11b | 0.393 | zgc:136930 | -0.159 |
| cdaa | 0.392 | s100v2 | -0.159 |
| tpm4a | 0.388 | aep1 | -0.158 |
| znfl2a | 0.387 | itgb4 | -0.158 |