| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb10a | 0.372 | gapdhs | -0.140 |
| cdx4 | 0.356 | krt91 | -0.134 |
| hoxb7a | 0.352 | rplp2 | -0.128 |
| hoxb9a | 0.337 | eef1da | -0.127 |
| hoxd12a | 0.318 | capns1a | -0.124 |
| BX005254.3 | 0.318 | anxa1a | -0.122 |
| hoxa10b | 0.296 | aqp3a | -0.120 |
| hoxd10a | 0.285 | krtt1c19e | -0.118 |
| cdaa | 0.283 | col1a1b | -0.114 |
| hoxa9a | 0.276 | rbp4 | -0.113 |
| hoxd9a | 0.273 | si:dkey-33c14.3 | -0.112 |
| emx2 | 0.272 | sparc | -0.110 |
| hoxa9b | 0.269 | cotl1 | -0.105 |
| insl5a | 0.267 | s100a10b | -0.105 |
| apela | 0.267 | anxa2a | -0.104 |
| LOC101882251 | 0.267 | cxl34b.11 | -0.104 |
| hoxc6b | 0.265 | ahcy | -0.103 |
| hoxc3a | 0.264 | ak1 | -0.102 |
| sp5l | 0.263 | col1a1a | -0.101 |
| crabp2a | 0.258 | col1a2 | -0.101 |
| sp8b | 0.250 | si:ch211-39i22.1 | -0.100 |
| apoc1 | 0.250 | pycard | -0.099 |
| hoxa11b | 0.250 | capgb | -0.098 |
| hoxc8a | 0.248 | epgn | -0.097 |
| vcana | 0.245 | col14a1b | -0.096 |
| hoxc11b | 0.242 | postnb | -0.094 |
| hoxd11a | 0.241 | s100v2 | -0.093 |
| BX927258.1 | 0.237 | pvalb1 | -0.093 |
| XLOC-001603 | 0.233 | pvalb2 | -0.093 |
| nkx1.2la | 0.229 | itm2bb | -0.093 |
| nradd | 0.227 | zgc:136930 | -0.093 |
| ccdc3a | 0.222 | krt5 | -0.092 |
| hspb1 | 0.220 | igfbp7 | -0.090 |
| prickle1a | 0.217 | wu:fa03e10 | -0.087 |
| tpm4a | 0.215 | si:ch211-105c13.3 | -0.086 |