| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fgf20a | 0.469 | ucmab | -0.106 |
| gdf11 | 0.447 | zgc:113232 | -0.103 |
| hoxd10a | 0.432 | matn3a | -0.102 |
| BX005254.3 | 0.419 | si:ch73-23l24.1 | -0.099 |
| hoxb10a | 0.418 | epyc | -0.099 |
| si:ch211-129o18.4 | 0.398 | col2a1a | -0.098 |
| her12 | 0.390 | zmp:0000000760 | -0.097 |
| fgf4 | 0.389 | col9a1b | -0.094 |
| alpi.1 | 0.385 | col9a2 | -0.093 |
| hoxd9a | 0.362 | cmn | -0.093 |
| sst6 | 0.360 | chad | -0.092 |
| fzd10 | 0.341 | si:dkey-31g6.6 | -0.091 |
| sall4 | 0.338 | krt8 | -0.090 |
| her15.1 | 0.337 | col11a2 | -0.090 |
| her4.1 | 0.332 | chrd | -0.090 |
| hoxd12a | 0.330 | krt5 | -0.089 |
| fgf3 | 0.319 | marcksl1b | -0.087 |
| fam49al | 0.311 | col11a1a | -0.086 |
| aplnr2 | 0.310 | cnmd | -0.085 |
| lrrc17 | 0.310 | matn3b | -0.082 |
| hoxc3a | 0.308 | krt91 | -0.081 |
| parvb | 0.307 | krt18a.1 | -0.081 |
| pcp4a | 0.307 | wfdc2 | -0.080 |
| htr5aa | 0.307 | si:dkey-6n6.1 | -0.080 |
| fn1a | 0.305 | si:ch211-243g18.2 | -0.080 |
| fgf8a | 0.300 | col9a3 | -0.080 |
| hoxb7a | 0.296 | rgcc | -0.078 |
| hoxd11a | 0.290 | FQ323156.1 | -0.077 |
| hoxa9a | 0.288 | thbs1b | -0.076 |
| tmem134 | 0.284 | scube2 | -0.076 |
| cdx4 | 0.275 | stm | -0.076 |
| cdaa | 0.271 | si:ch211-152c2.3 | -0.075 |
| hoxc11a | 0.265 | si:dkey-1j5.4 | -0.075 |
| XLOC-003690 | 0.264 | agtrap | -0.075 |
| her1 | 0.264 | si:dkey-174i8.1 | -0.075 |