| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.572 | gapdhs | -0.184 |
| hoxc8a | 0.512 | krt91 | -0.173 |
| BX005254.3 | 0.509 | eef1da | -0.172 |
| hoxb10a | 0.503 | capns1a | -0.171 |
| hoxb9a | 0.500 | rplp2 | -0.170 |
| hoxb7a | 0.481 | anxa1a | -0.169 |
| hoxd9a | 0.447 | aqp3a | -0.163 |
| emx2 | 0.436 | cotl1 | -0.156 |
| LOC101882251 | 0.435 | krtt1c19e | -0.153 |
| apoc1 | 0.422 | anxa2a | -0.150 |
| hoxc3a | 0.420 | col1a1b | -0.149 |
| insl5a | 0.418 | sparc | -0.145 |
| hoxa10b | 0.409 | col1a2 | -0.144 |
| sp8b | 0.407 | s100a10b | -0.141 |
| hoxd10a | 0.403 | si:dkey-33c14.3 | -0.140 |
| vcana | 0.403 | ahcy | -0.139 |
| crabp2a | 0.399 | capgb | -0.138 |
| hoxd12a | 0.390 | col1a1a | -0.137 |
| hoxa9b | 0.376 | rbp4 | -0.137 |
| nradd | 0.371 | rps29 | -0.133 |
| hoxa9a | 0.357 | cxl34b.11 | -0.133 |
| prickle1a | 0.356 | epgn | -0.130 |
| hoxd3a | 0.350 | ak1 | -0.130 |
| hoxd11a | 0.349 | pycard | -0.129 |
| mllt3 | 0.345 | s100v1 | -0.129 |
| BX927258.1 | 0.341 | igfbp7 | -0.127 |
| b3gnt7 | 0.339 | s100v2 | -0.124 |
| tmeff1b | 0.330 | pvalb1 | -0.122 |
| asb11 | 0.327 | postnb | -0.121 |
| znfl2a | 0.321 | pvalb2 | -0.120 |
| inaa | 0.317 | si:ch211-39i22.1 | -0.120 |
| cdaa | 0.309 | icn | -0.119 |
| ptgs1 | 0.307 | krt5 | -0.119 |
| sp8a | 0.306 | zgc:136930 | -0.114 |
| ccdc3a | 0.303 | col14a1b | -0.114 |