| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fgf20a | 0.601 | krt8 | -0.222 |
| fgf4 | 0.575 | krt18a.1 | -0.204 |
| hoxd10a | 0.548 | si:ch73-23l24.1 | -0.188 |
| si:ch211-129o18.4 | 0.548 | zgc:113232 | -0.187 |
| hoxb10a | 0.539 | col11a2 | -0.172 |
| her12 | 0.523 | epyc | -0.169 |
| alpi.1 | 0.516 | zmp:0000000760 | -0.168 |
| sall4 | 0.506 | FQ323156.1 | -0.166 |
| hoxc3a | 0.505 | cmn | -0.166 |
| hoxd9a | 0.504 | ucmab | -0.165 |
| BX005254.3 | 0.494 | col9a1b | -0.164 |
| her15.1 | 0.475 | col2a1a | -0.163 |
| her4.1 | 0.474 | col9a2 | -0.162 |
| fn1a | 0.466 | marcksl1b | -0.160 |
| sst6 | 0.458 | matn3a | -0.156 |
| si:ch211-27e6.1 | 0.457 | cnmd | -0.155 |
| parvb | 0.453 | ehd2b | -0.149 |
| lrrc17 | 0.451 | rgcc | -0.145 |
| emid1 | 0.451 | krt5 | -0.145 |
| myclb | 0.447 | si:dkey-31g6.6 | -0.144 |
| pcp4a | 0.446 | snorc | -0.143 |
| hoxd12a | 0.444 | cavin2b | -0.142 |
| fgf3 | 0.444 | gas2b | -0.141 |
| fzd10 | 0.444 | matn3b | -0.140 |
| hoxb7a | 0.424 | col9a3 | -0.139 |
| hoxa9a | 0.415 | cav2 | -0.138 |
| tmem134 | 0.411 | col11a1a | -0.137 |
| cdx4 | 0.410 | wfdc2 | -0.137 |
| fam49al | 0.406 | chad | -0.135 |
| her1 | 0.404 | susd5 | -0.135 |
| nradd | 0.403 | atp1b3b | -0.134 |
| wnt5b | 0.398 | fxyd6l | -0.134 |
| fgf8a | 0.397 | krt94 | -0.134 |
| hoxc8a | 0.386 | mmp23bb | -0.133 |
| fibinb | 0.380 | pleca | -0.132 |