| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb3a | 0.262 | en2b | -0.056 |
| hoxc4a | 0.162 | si:ch211-152c2.3 | -0.048 |
| hoxd3a | 0.158 | hspb1 | -0.046 |
| hoxa3a | 0.152 | aldob | -0.044 |
| hoxc1a | 0.146 | otx1 | -0.044 |
| hoxb5b | 0.143 | otx2a | -0.044 |
| hoxd4a | 0.141 | ctnnb1 | -0.043 |
| hoxc3a | 0.127 | stm | -0.042 |
| meis1b | 0.122 | otx2b | -0.042 |
| raraa | 0.120 | apoc1 | -0.041 |
| hoxb8a | 0.115 | ncl | -0.039 |
| hoxb5a | 0.113 | fbl | -0.039 |
| meis2b | 0.112 | islr2 | -0.039 |
| hoxb6b | 0.110 | dkc1 | -0.039 |
| hoxb6a | 0.107 | gnl3 | -0.038 |
| znf503 | 0.102 | gar1 | -0.038 |
| crabp1b | 0.099 | rsl1d1 | -0.038 |
| hoxb2a | 0.095 | apoeb | -0.038 |
| rxrga | 0.092 | tcf7l2 | -0.038 |
| si:ch73-386h18.1 | 0.089 | lef1 | -0.038 |
| rarga | 0.086 | ywhaz | -0.038 |
| pik3r3b | 0.084 | en2a | -0.037 |
| gbx1 | 0.079 | ldhba | -0.037 |
| slc1a3a | 0.078 | nop10 | -0.037 |
| mir219-3 | 0.078 | cycsb | -0.036 |
| mab21l2 | 0.078 | nop58 | -0.036 |
| hoxa5a | 0.077 | npm1a | -0.036 |
| tshz1 | 0.077 | nop2 | -0.036 |
| hoxb1b | 0.076 | nhp2 | -0.036 |
| tshz2 | 0.075 | xpr1a | -0.036 |
| BX322661.2 | 0.074 | polr3gla | -0.035 |
| si:ch211-57n23.4 | 0.074 | zmp:0000000624 | -0.035 |
| znf703 | 0.071 | snu13b | -0.035 |
| CR383676.1 | 0.070 | slc6a1a | -0.035 |
| lbx1a | 0.070 | tpi1b | -0.035 |